Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 Y_RNA.159-201ENST00000363674 87 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 SNORA38.1-201ENST00000364172 131 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 RNU1-100P-201ENST00000365255 165 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1029P-201ENST00000384109 107 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 RNU6-19P-201ENST00000384718 107 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 MIR23B-201ENST00000384832 97 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 RNA5SP181-201ENST00000410246 98 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AL592148.1-201ENST00000413568 445 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC016831.2-201ENST00000417179 352 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AL365338.1-201ENST00000422282 858 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 RN7SL807P-201ENST00000470923 297 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC116655.1-201ENST00000508324 901 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 HMGB3P3-201ENST00000510526 400 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 RNA5SP503-201ENST00000517047 117 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC234778.2-201ENST00000566241 354 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 MIR1254-2-201ENST00000579553 63 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC025449.1-201ENST00000603896 529 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC080013.6-201ENST00000606185 215 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 AC092656.1-203ENST00000624134 423 ntBASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
CPSF2Q9P2I0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 MIR6073-201ENST00000352083 89 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1287P-201ENST00000362914 107 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RNU6-116P-201ENST00000384042 109 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1060P-201ENST00000384664 107 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1179P-201ENST00000384667 107 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 MIR144-201ENST00000384886 86 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RNU2-9P-201ENST00000410194 145 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 BTF3L4P1-201ENST00000413813 468 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AL627311.1-201ENST00000431514 115 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 NDUFB1P2-201ENST00000449477 176 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AL358832.1-201ENST00000497800 389 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 ACA59.2-201ENST00000517061 156 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 BTF3P12-201ENST00000519620 469 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AC090136.1-201ENST00000520009 240 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AC025678.1-201ENST00000567861 338 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AC060766.3-201ENST00000591442 263 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AL138889.2-201ENST00000603883 242 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AC097065.2-201ENST00000608159 533 ntBASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.82□□□□□ -1.96
CPSF2Q9P2I0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 RNA5SP374-201ENST00000362939 125 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 RNU6-371P-201ENST00000364283 108 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 RNU6-606P-201ENST00000384721 111 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 MIR147B-201ENST00000390185 80 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 Y_RNA.582-201ENST00000391023 95 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC007064.1-201ENST00000412238 351 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 MTATP6P18-201ENST00000417994 673 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AL596276.1-201ENST00000434465 418 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC004383.1-201ENST00000438135 289 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 NANOGNBP1-201ENST00000448444 480 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 BX510359.1-201ENST00000456973 237 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 RPS3AP17-201ENST00000472594 777 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC091133.4-201ENST00000511142 308 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 OR5BN1P-201ENST00000532955 829 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC092325.1-201ENST00000566449 554 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 MYL12BP1-201ENST00000569826 507 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 MTND1P15-201ENST00000579262 949 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC087683.1-201ENST00000591187 441 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC008121.1-201ENST00000603244 268 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC087045.1-201ENST00000605856 382 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 HMGB1P24-202ENST00000615653 685 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC010378.1-201ENST00000619270 362 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 AC092593.1-201ENST00000515413 1815 ntBASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CPSF2Q9P2I0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC010329.5-201ENST00000623497 2174 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC080128.1-201ENST00000474389 1917 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms