Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC099786.3-201ENST00000565735 1410 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 Y_RNA.269-201ENST00000364685 89 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 U3.13-201ENST00000364804 214 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 MIR561-201ENST00000385216 97 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 DHFRP6-201ENST00000401776 268 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AP000275.1-201ENST00000411943 390 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC092473.1-201ENST00000441098 221 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC005297.2-201ENST00000450430 606 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AP003400.5-201ENST00000624827 617 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 RNU5E-8P-201ENST00000363502 116 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 RNU6-343P-201ENST00000364709 104 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 SNORA67.6-201ENST00000391093 99 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AL109755.1-201ENST00000401791 649 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 RNU2-63P-201ENST00000410792 194 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AC007327.1-201ENST00000447461 264 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 SNRPGP9-201ENST00000456025 225 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AC117503.1-201ENST00000472241 394 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 HSPE1P23-201ENST00000509838 286 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AC026271.5-201ENST00000577873 130 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AC091057.3-201ENST00000602684 733 ntBASIC1.24□□□□□ -2.21
CCDC88CQ9P219 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC88CQ9P219 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 RNU6-748P-201ENST00000384648 107 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 RNU2-49P-201ENST00000410666 184 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 PTGES3P4-201ENST00000426243 356 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC013262.1-201ENST00000426710 252 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 ELOCP14-201ENST00000428070 331 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 ELOCP7-201ENST00000439968 331 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL137159.1-201ENST00000452808 512 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL163540.1-201ENST00000485382 386 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC068587.4-201ENST00000533893 186 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC021739.1-201ENST00000559631 174 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 MTCYBP22-201ENST00000603788 447 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 SNORD14A-201ENST00000606526 91 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AF129408.1-201ENST00000608767 431 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC099842.1-201ENST00000619919 596 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 LINC02211-204ENST00000642024 1070 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AP000648.3-201ENST00000623539 4507 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL590084.1-201ENST00000407885 387 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 MIR1287-201ENST00000408492 90 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL139421.1-201ENST00000423010 169 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 MTND5P14-201ENST00000441481 1267 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC020550.1-201ENST00000447385 163 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC012308.1-201ENST00000451232 178 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 RPL21P134-201ENST00000453468 483 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 FCF1P6-201ENST00000456841 595 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 KLF3P2-201ENST00000465138 268 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 RPL31P58-201ENST00000469001 379 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC021382.1-201ENST00000483523 359 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC109445.1-201ENST00000512356 383 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 RNU6-1053P-201ENST00000515930 101 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC006199.1-201ENST00000548728 219 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 DUXAP1-201ENST00000556632 463 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC104072.1-201ENST00000568817 668 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AL354943.1-201ENST00000572103 781 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 AC112220.3-201ENST00000605502 502 ntBASIC1.23□□□□□ -2.21
CCDC88CQ9P219 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC88CQ9P219 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 ZNF702P-202ENST00000434269 1966 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RNU6-289P-201ENST00000364093 107 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RNU6-1257P-201ENST00000384625 110 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms