Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU6-751P-201ENST00000516382 101 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-362P-201ENST00000516736 90 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AP001189.2-201ENST00000527320 189 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 SLC2A13P1-201ENST00000531560 322 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC135279.1-201ENST00000543493 504 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC021739.1-201ENST00000559631 174 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AL731537.2-201ENST00000561565 951 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC109446.2-201ENST00000567872 497 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC005261.5-201ENST00000596280 355 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC091057.3-201ENST00000602684 733 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC231657.1-201ENST00000624313 397 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC091965.5-201ENST00000624785 342 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 USP9YP6-201ENST00000413550 854 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RPS29P1-201ENST00000465274 159 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 HMGB1P35-201ENST00000503360 598 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC121161.1-201ENST00000510606 652 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-581P-201ENST00000516214 105 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-1261P-201ENST00000517194 104 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 MIR3167-201ENST00000579623 85 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 ELOCP5-201ENST00000604924 333 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC097655.1-201ENST00000635075 318 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 CBX3P1-201ENST00000325243 554 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-486P-201ENST00000363116 107 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-359P-201ENST00000365466 108 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-549P-201ENST00000384433 107 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-114P-201ENST00000384704 105 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC078974.1-201ENST00000411597 223 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RPL21P24-201ENST00000413752 448 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC019178.2-201ENST00000423595 505 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 SDAD1P3-201ENST00000427380 333 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 ELOCP14-201ENST00000428070 331 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 MTCO3P5-201ENST00000433620 714 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 ELOCP7-201ENST00000439968 331 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC245102.2-201ENST00000448956 180 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC008379.1-201ENST00000463655 464 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC096745.1-201ENST00000509945 370 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC093677.1-201ENST00000514414 678 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RN7SKP258-201ENST00000517151 304 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AP003497.1-201ENST00000528472 562 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 DUXAP5-201ENST00000529668 529 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AL078605.1-201ENST00000603529 500 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AC239868.4-201ENST00000608318 671 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 AL603758.1-201ENST00000618654 241 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 MIR1322-201ENST00000638013 71 ntBASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-778P-201ENST00000363269 103 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 SNORA62.1-201ENST00000364287 154 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.224-201ENST00000364308 111 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 RPL21P1-201ENST00000399532 476 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 RNU2-41P-201ENST00000410991 178 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 CYCSP33-201ENST00000414485 327 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AL449283.1-202ENST00000418249 604 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AL354941.1-201ENST00000438600 464 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AL691517.1-201ENST00000440833 1235 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 RPL30P12-201ENST00000474666 353 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 RN7SKP265-201ENST00000516448 223 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC136443.5-201ENST00000603741 370 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC024581.2-201ENST00000619986 252 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 AC091895.1-201ENST00000624494 256 ntBASIC1□□□□□ -2.25
KIAA1549Q9HCM3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1□□□□□ -2.25
KIAA1549Q9HCM3 U6.112-201ENST00000384129 70 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 SNORA8-201ENST00000384574 139 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MIR676-201ENST00000390702 67 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 RNA5SP212-201ENST00000391223 107 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms