Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC011352.1-201ENST00000512300 793 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MRPS36P2-201ENST00000512569 299 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 RN7SKP282-201ENST00000516824 299 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 SNORD60.2-201ENST00000516883 86 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 RNA5SP380-201ENST00000517190 98 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MTND4LP26-201ENST00000518144 282 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MIR5583-1-201ENST00000580941 59 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MIR3941-201ENST00000582572 103 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AP003465.2-201ENST00000602571 373 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AL391813.1-201ENST00000603098 260 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 U2.17-201ENST00000611454 95 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.01□□□□□ -1.93
BRF2Q9HAW0 AC093536.2-201ENST00000565257 1406 ntBASIC3.01□□□□□ -1.93
BRF2Q9HAW0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3□□□□□ -1.93
BRF2Q9HAW0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
BRF2Q9HAW0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
BRF2Q9HAW0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
BRF2Q9HAW0 SNORD3E-201ENST00000362899 217 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 SNORD14B-201ENST00000364533 90 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 RNU6-19P-201ENST00000384718 107 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 RPL21P3-201ENST00000395517 478 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AL592114.1-201ENST00000403842 483 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3□□□□□ -1.93
BRF2Q9HAW0 AL353621.1-201ENST00000418219 243 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 PTGES3P4-201ENST00000426243 356 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3□□□□□ -1.93
BRF2Q9HAW0 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3□□□□□ -1.93
BRF2Q9HAW0 AC009296.1-201ENST00000443146 155 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 UQCRHP3-201ENST00000451503 251 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AC146507.2-201ENST00000460608 476 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3□□□□□ -1.93
BRF2Q9HAW0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3□□□□□ -1.93
BRF2Q9HAW0 MIR892C-201ENST00000516410 77 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 SCARNA11.3-201ENST00000517276 130 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3□□□□□ -1.93
BRF2Q9HAW0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3□□□□□ -1.93
BRF2Q9HAW0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3□□□□□ -1.93
BRF2Q9HAW0 AC011471.1-201ENST00000585766 187 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 NRBF2P5-201ENST00000603087 788 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 RMST_4.1-201ENST00000616886 107 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 MIR7975-201ENST00000619350 68 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 AL160394.1-201ENST00000624765 724 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 SCARNA4-202ENST00000625402 129 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3□□□□□ -1.93
BRF2Q9HAW0 MIR622-201ENST00000638396 96 ntBASIC3□□□□□ -1.93
BRF2Q9HAW0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
BRF2Q9HAW0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3□□□□□ -1.93
BRF2Q9HAW0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
BRF2Q9HAW0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 Y_RNA.38-201ENST00000362617 102 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 Y_RNA.295-201ENST00000364918 102 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RNU6-898P-201ENST00000365627 104 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 Z98749.2-208ENST00000381646 500 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RNU6-748P-201ENST00000384648 107 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RAP1BP3-201ENST00000407180 549 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC245054.2-201ENST00000415639 319 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RPL7P37-201ENST00000425095 738 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AL669831.1-202ENST00000428504 417 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 GTF2IP13-201ENST00000438487 386 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 SNORA84-201ENST00000459229 133 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC091153.1-201ENST00000466297 402 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 RPL23AP11-201ENST00000475260 469 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 FAM92A1P2-202ENST00000504766 877 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 MTCO3P9-201ENST00000506989 781 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC092325.1-201ENST00000566449 554 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC073539.2-201ENST00000597113 165 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC008739.3-201ENST00000603262 127 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC090617.7-201ENST00000623952 126 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC022418.1-201ENST00000624118 445 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 MIR3688-2-201ENST00000636963 87 ntBASIC2.99□□□□□ -1.93
BRF2Q9HAW0 AC004520.1-201ENST00000608362 1413 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms