Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.61□□□□□ -1.67
CNTNAP4Q9C0A0 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
CNTNAP4Q9C0A0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNTNAP4Q9C0A0 IPO8P1-201ENST00000455509 3109 ntBASIC4.61□□□□□ -1.67
CNTNAP4Q9C0A0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 MTND5P6-201ENST00000422338 1798 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AC138393.1-203ENST00000327086 343 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-249P-201ENST00000363016 102 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RNU4-50P-201ENST00000364361 141 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 SNORA20.1-201ENST00000364790 130 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 SNORD17-201ENST00000390930 237 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RNU2-43P-201ENST00000410306 190 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AC092809.3-201ENST00000415453 231 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 MTCO3P19-201ENST00000415864 321 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RPS15AP6-201ENST00000420703 385 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 FCF1P4-201ENST00000448326 183 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AL031274.1-201ENST00000450334 232 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 ACA59.1-201ENST00000515966 143 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 MIR4273-201ENST00000582824 84 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AC078899.3-201ENST00000599065 212 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 BDH2P1-201ENST00000602288 736 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-85P-201ENST00000605989 107 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 MIR7112-201ENST00000616126 65 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AC103858.2-201ENST00000621471 543 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AL031601.2-202ENST00000622650 282 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 AC093535.2-201ENST00000624769 2326 ntBASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CNTNAP4Q9C0A0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 SNORA38.1-201ENST00000364172 131 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 Y_RNA.214-201ENST00000364201 112 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 RNU4-42P-201ENST00000364738 142 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 Y_RNA.555-201ENST00000384673 110 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 Y_RNA.562-201ENST00000384695 113 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 MIR625-201ENST00000385047 85 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AL445529.1-201ENST00000398713 389 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AL030996.1-201ENST00000411430 235 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 RPL21P90-201ENST00000415692 466 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC139712.2-201ENST00000424302 339 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 MTND5P15-201ENST00000434246 349 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 RPL12P46-201ENST00000436610 195 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AL590664.1-201ENST00000448065 339 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC025518.1-201ENST00000479856 347 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC018437.1-201ENST00000492214 406 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC093663.1-201ENST00000497190 394 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 SNORA25.11-201ENST00000515935 105 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 RNU6-138P-201ENST00000515952 107 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC022868.1-201ENST00000517767 391 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 LRRC37A5P-203ENST00000580181 585 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 OR1M4P-201ENST00000589199 287 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 MIR15A-201ENST00000607334 83 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 AC096772.1-201ENST00000609146 564 ntBASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CNTNAP4Q9C0A0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTNAP4Q9C0A0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.59□□□□□ -1.68
CNTNAP4Q9C0A0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.14-201ENST00000362415 103 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RNU4-44P-201ENST00000363050 141 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.518-201ENST00000384552 113 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-607P-201ENST00000411283 108 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 BX276092.3-201ENST00000424182 230 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RPL21P2-201ENST00000440049 481 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RPL39P38-201ENST00000467018 153 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RPS15AP34-201ENST00000487776 387 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 AC025465.3-201ENST00000510570 311 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-911P-201ENST00000516523 104 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 RN7SKP234-201ENST00000517173 224 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms