Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MTND1P28-201ENST00000435623 950 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 RPL22P13-201ENST00000493291 347 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 RNU6-1223P-201ENST00000517124 104 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AP001189.2-201ENST00000527320 189 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AL121821.2-201ENST00000556081 394 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 MIR151B-201ENST00000584249 96 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 BNIP3P25-201ENST00000596023 559 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 BNIP3P23-201ENST00000599655 511 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 OR4H6P-202ENST00000603819 340 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AC079416.3-201ENST00000624479 549 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
TRIM4Q9C037 SNORA25B-201ENST00000365507 128 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 U6.112-201ENST00000384129 70 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC097463.2-201ENST00000421074 142 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC007435.1-201ENST00000421086 415 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 PTGES3P4-201ENST00000426243 356 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM4Q9C037 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 RSU1P2-202ENST00000437884 485 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 AL161788.1-201ENST00000441805 169 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 CYP2C59P-201ENST00000457790 269 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 RPL31P58-201ENST00000469001 379 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC090330.1-201ENST00000588646 764 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 AC080078.3-201ENST00000605407 463 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 AF129408.1-201ENST00000608767 431 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 AL118508.4-201ENST00000624142 1176 ntBASIC1.4□□□□□ -2.19
TRIM4Q9C037 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM4Q9C037 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.4□□□□□ -2.19
TRIM4Q9C037 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM4Q9C037 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM4Q9C037 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
TRIM4Q9C037 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TRIM4Q9C037 MIR625-201ENST00000385047 85 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 MIR95-201ENST00000385072 81 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 TXNP7-201ENST00000406296 293 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM4Q9C037 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM4Q9C037 MRPL42P4-201ENST00000453267 443 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 snoU13.8-201ENST00000458890 104 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 AC018868.1-201ENST00000491307 315 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 AC114801.2-201ENST00000503825 781 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 RNA5SP165-201ENST00000517142 115 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 AC034114.1-201ENST00000520293 285 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 AC103810.8-201ENST00000607347 118 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
TRIM4Q9C037 AC011939.3-201ENST00000613686 466 ntBASIC1.39□□□□□ -2.19
TRIM4Q9C037 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.39□□□□□ -2.19
TRIM4Q9C037 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM4Q9C037 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM4Q9C037 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM4Q9C037 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.38□□□□□ -2.19
TRIM4Q9C037 ZNF29P-201ENST00000225587 168 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNU6-216P-201ENST00000363282 104 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNU1-22P-201ENST00000363334 158 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 SNORA40.19-201ENST00000390846 128 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNA5SP212-201ENST00000391223 107 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 BTF3L4P2-201ENST00000392798 346 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 BTF3L4P3-201ENST00000418879 476 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM4Q9C037 BX119904.4-201ENST00000424402 301 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 MTCO1P53-201ENST00000441633 699 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM4Q9C037 RPL36AP48-201ENST00000485521 314 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNA5SP436-201ENST00000516020 115 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNU6-714P-201ENST00000516963 103 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.38□□□□□ -2.19
TRIM4Q9C037 DUXAP5-201ENST00000529668 529 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 AC022254.1-201ENST00000567857 235 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 MIR4713-201ENST00000582691 75 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 AC011712.1-201ENST00000588959 234 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM4Q9C037 AC100814.1-201ENST00000606963 623 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 AC083806.3-201ENST00000614016 455 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms