Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NUP35P1-201ENST00000422734 947 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 RPL23AP69-201ENST00000431134 458 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 ELOCP24-201ENST00000456370 334 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 RNA5SP310-201ENST00000459084 116 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 RPL7P5-201ENST00000471472 736 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC025445.1-201ENST00000502728 300 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC017037.1-201ENST00000508460 471 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 RNU6-566P-201ENST00000516790 107 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AP003122.3-201ENST00000526316 255 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AL157871.3-201ENST00000557231 293 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC004817.2-201ENST00000561794 651 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 MIR5583-1-201ENST00000580941 59 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 AL355598.1-201ENST00000604169 202 ntBASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN3Q9BTN0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC121333.1-201ENST00000567488 2709 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 Y_RNA.148-201ENST00000363557 117 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RNU6-715P-201ENST00000365204 103 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RNU6-505P-201ENST00000384427 107 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MIR325-201ENST00000385260 98 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MIR921-201ENST00000401133 56 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AL139039.1-201ENST00000401900 692 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RPL31P12-201ENST00000422587 358 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AL158071.1-201ENST00000430315 461 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MTCYBP9-201ENST00000431021 303 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 FABP5P14-201ENST00000437273 393 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RPS15AP27-201ENST00000449183 343 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MTCO3P10-201ENST00000455912 772 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RPL30P15-201ENST00000457129 321 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 Y_RNA.653-201ENST00000459091 95 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 SNRPGP3-201ENST00000469405 227 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 HMGB1P30-201ENST00000492455 606 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 TRBVA-201ENST00000498804 316 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MTCYBP40-201ENST00000509390 1135 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RPL39P5-202ENST00000512505 151 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RNA5SP454-201ENST00000517231 127 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 RNU6-794P-201ENST00000517261 64 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 CASP1P1-201ENST00000526345 212 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC084851.1-201ENST00000529105 249 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC011602.1-201ENST00000546484 331 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 IMMP1LP2-201ENST00000552954 492 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MIR4790-201ENST00000577799 79 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MIR5690-201ENST00000583739 73 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MIR7851-201ENST00000610611 160 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 AC099506.2-201ENST00000623074 221 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MTND5P10-201ENST00000603719 1809 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 MTND5P19-201ENST00000424872 1794 ntBASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.78□□□□□ -1.8
LRFN3Q9BTN0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
LRFN3Q9BTN0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
LRFN3Q9BTN0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 Y_RNA.193-201ENST00000363979 102 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 RNU6-140P-201ENST00000384566 108 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AP000567.1-201ENST00000406413 156 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 MIR548F4-201ENST00000408515 105 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 SNRPEP9-201ENST00000436794 238 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 CEACAMP4-201ENST00000457676 421 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 RPL7P43-201ENST00000478876 753 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 RN7SKP295-201ENST00000517264 153 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AP000763.2-201ENST00000540641 163 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AL360157.1-201ENST00000565962 87 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 MIR5004-201ENST00000579078 107 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 MIR4680-201ENST00000580906 66 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 MIR3672-201ENST00000584290 82 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AC011373.1-201ENST00000607270 237 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 AL136164.4-201ENST00000625013 2135 ntBASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms