Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AL445669.1-201ENST00000426743 755 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 RPL23AP3-201ENST00000453844 468 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 RPL7P18-201ENST00000478965 734 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC020699.1-201ENST00000505161 445 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC117522.2-201ENST00000510049 657 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 RNU6-572P-201ENST00000516724 80 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 RNU6-678P-201ENST00000516832 109 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 DUXAP1-201ENST00000556632 463 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AL670379.10-201ENST00000604330 253 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AL670379.9-201ENST00000605428 253 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC087045.1-201ENST00000605856 382 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC096772.1-201ENST00000609146 564 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AC009318.2-201ENST00000610917 651 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 MIR7843-201ENST00000622274 79 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
UPK3BQ9BT76 AP000776.1-201ENST00000530032 1663 ntBASIC1.34□□□□□ -2.19
UPK3BQ9BT76 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.34□□□□□ -2.2
UPK3BQ9BT76 RNU5E-1-201ENST00000362477 120 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 RNU5E-10P-201ENST00000363506 118 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 SNORA25B-201ENST00000365507 128 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 RNU6-723P-201ENST00000383973 107 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 RNU6-817P-201ENST00000391083 104 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 SNORA26.9-201ENST00000391322 122 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 RNA5SP489-201ENST00000410986 109 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC078974.1-201ENST00000411597 223 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC127391.1-201ENST00000411737 98 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 HMGN2P19-201ENST00000425149 265 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC027124.2-201ENST00000428249 105 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 TXNL1P1-201ENST00000429528 554 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AL353689.1-201ENST00000438895 199 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 RPL23AP6-201ENST00000446637 472 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC107393.1-201ENST00000512403 346 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 RNU6-295P-201ENST00000516901 104 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC233702.2-202ENST00000562547 291 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AL049838.1-201ENST00000563647 981 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC010928.2-201ENST00000588017 287 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 BNIP3P31-201ENST00000604515 566 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AC112220.3-201ENST00000605502 502 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 YWHAEP7-203ENST00000622054 312 ntBASIC1.33□□□□□ -2.2
UPK3BQ9BT76 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK3BQ9BT76 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL356432.1-201ENST00000405809 419 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 MIR1289-2-201ENST00000408360 111 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 XKRYP1-201ENST00000423438 492 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 RAC1P6-201ENST00000423911 575 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 XKRYP2-201ENST00000432915 492 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 USP9YP8-201ENST00000441913 500 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 HMGB1P35-201ENST00000503360 598 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 MTND4P2-201ENST00000507767 1203 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 SNORA48.11-201ENST00000517015 89 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC009902.1-201ENST00000519351 183 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC084851.1-201ENST00000529105 249 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC023813.2-201ENST00000564321 469 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC026271.5-201ENST00000577873 130 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 MIR5089-201ENST00000580047 84 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC243960.4-201ENST00000600532 288 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms