Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
NPAS2Q99743 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.17□□□□□ -2.06
NPAS2Q99743 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
NPAS2Q99743 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
NPAS2Q99743 AC131280.1-202ENST00000624067 4211 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RNU6-500P-201ENST00000362349 107 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 U8.2-201ENST00000363156 134 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RNU6-1280P-201ENST00000365211 107 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RNU5E-6P-201ENST00000365574 115 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RNU2-36P-201ENST00000410361 191 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC097463.2-201ENST00000421074 142 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RPS27AP14-201ENST00000422868 454 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 RPL7P34-201ENST00000433316 712 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 MTCYBP39-201ENST00000437562 491 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.16□□□□□ -2.06
NPAS2Q99743 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AL133217.1-201ENST00000450980 425 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC003071.1-201ENST00000451219 789 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 ZNF114P1-201ENST00000453500 292 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC116655.1-201ENST00000508324 901 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC116347.2-201ENST00000514912 523 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 RNU6-1315P-201ENST00000517187 99 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC025755.1-201ENST00000521306 278 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 DUXAP5-201ENST00000529668 529 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPAS2Q99743 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AL138976.2-201ENST00000563989 694 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NPAS2Q99743 AC090616.2-202ENST00000584248 222 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
NPAS2Q99743 RNU6-91P-201ENST00000607774 107 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AL391813.2-201ENST00000609113 322 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.16□□□□□ -2.06
NPAS2Q99743 Z75746.1-201ENST00000440243 2080 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 AC092104.1-201ENST00000497346 1441 ntBASIC2.16□□□□□ -2.06
NPAS2Q99743 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
NPAS2Q99743 Y_RNA.169-201ENST00000363745 96 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 RNU6-809P-201ENST00000384461 107 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 Y_RNA.560-201ENST00000384689 102 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 BTF3P7-201ENST00000407097 488 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AL591212.2-201ENST00000433923 257 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.15□□□□□ -2.07
NPAS2Q99743 BTF3P15-201ENST00000455606 336 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 RPL36AP48-201ENST00000485521 314 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.15□□□□□ -2.07
NPAS2Q99743 RNU2-10P-201ENST00000516375 211 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 SNORA31.19-201ENST00000517079 126 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 RNU6-232P-201ENST00000517144 64 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC079598.5-201ENST00000547460 117 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AC145350.1-201ENST00000567426 208 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AP000860.1-201ENST00000605250 559 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC121334.2-201ENST00000605387 271 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC068276.1-201ENST00000605793 379 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC103710.2-201ENST00000609912 942 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 MIR6895-201ENST00000613497 78 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.15□□□□□ -2.07
NPAS2Q99743 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NPAS2Q99743 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
NPAS2Q99743 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NPAS2Q99743 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NPAS2Q99743 RNU6-960P-201ENST00000364056 120 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 RNU1-148P-201ENST00000384472 162 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 MIR518D-201ENST00000385014 87 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 SNORA40C-201ENST00000391285 128 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 MTCYBP36-201ENST00000404146 440 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 FCF1P10-201ENST00000407590 479 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 RNU2-63P-201ENST00000410792 194 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 MTND1P23-201ENST00000416931 372 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.14□□□□□ -2.07
NPAS2Q99743 AC093106.2-201ENST00000428212 385 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AL139415.2-201ENST00000431968 163 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 RPL37P21-201ENST00000435890 276 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 RPS15AP9-201ENST00000439856 381 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AL078601.1-201ENST00000444542 271 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 EPS15P1-201ENST00000448836 336 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms