Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 AL669831.3-213ENST00000636676 183 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 AC007785.2-201ENST00000598627 1916 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX18Q96RF0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC007823.1-201ENST00000569932 1566 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC005183.1-201ENST00000603687 1979 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX18Q96RF0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-395P-201ENST00000365662 106 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-214P-201ENST00000384130 107 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-306P-201ENST00000384617 107 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-310P-201ENST00000384655 107 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 SNORA3.3-201ENST00000408712 125 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 CECR9-201ENST00000453421 199 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 ELOCP24-201ENST00000456370 334 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU7-138P-201ENST00000459479 64 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC090096.1-201ENST00000489168 390 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC026801.1-201ENST00000497178 464 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC116337.1-201ENST00000509680 687 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC008716.1-201ENST00000511084 513 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNA5SP208-201ENST00000516156 78 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-327P-201ENST00000516270 127 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU1-54P-201ENST00000517181 120 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AP003122.3-201ENST00000526316 255 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC084851.1-201ENST00000529105 249 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 ZNF192P1-203ENST00000565888 810 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 RNU6-85P-201ENST00000605989 107 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 AL157817.1-201ENST00000614264 790 ntBASIC3.35□□□□□ -1.87
SNX18Q96RF0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
SNX18Q96RF0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX18Q96RF0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX18Q96RF0 KPNA2P1-201ENST00000458289 1591 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 MTND5P19-201ENST00000424872 1794 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 RNU6-593P-201ENST00000364716 112 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 MIR606-201ENST00000384851 96 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 MIR325-201ENST00000385260 98 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 RNU6-308P-201ENST00000390957 107 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX18Q96RF0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 Y_RNA.646-201ENST00000410980 101 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 RNU6-607P-201ENST00000411283 108 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 CYCSP33-201ENST00000414485 327 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 MIR2053-201ENST00000459295 91 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AL163540.1-201ENST00000485382 386 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 RN7SL323P-201ENST00000494712 295 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC096745.1-201ENST00000509945 370 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC092436.3-201ENST00000511788 257 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 Y_RNA.711-201ENST00000516993 102 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC069113.1-201ENST00000517763 267 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC068657.1-201ENST00000520807 306 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 IGKV2D-19-201ENST00000523346 262 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
SNX18Q96RF0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNX18Q96RF0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SNX18Q96RF0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNX18Q96RF0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SNX18Q96RF0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNX18Q96RF0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SNX18Q96RF0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNX18Q96RF0 MTND5P10-201ENST00000603719 1809 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX18Q96RF0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 Y_RNA.202-201ENST00000364083 110 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 SNORA75B-201ENST00000384053 137 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 MIR30B-201ENST00000384850 88 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 RNU2-3P-201ENST00000410144 191 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 RN7SKP156-201ENST00000410308 342 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 RNA5SP31-201ENST00000411144 127 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX18Q96RF0 AL353621.1-201ENST00000418219 243 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 YPEL5P1-201ENST00000419731 367 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC092573.2-201ENST00000434546 243 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 Z82210.1-201ENST00000440037 231 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AL133547.1-201ENST00000448546 220 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 HMGB1P30-201ENST00000492455 606 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 RNU1-86P-201ENST00000516108 154 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms