Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC011155.2-201ENST00000623202 216 ntBASIC0.14□□□□□ -2.39
CSMD1Q96PZ7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 MIR411-201ENST00000362239 96 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC009518.2-201ENST00000418056 731 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 RPL7P30-201ENST00000420888 709 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AP001893.2-201ENST00000526949 202 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC109635.4-202ENST00000531666 412 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC019288.1-201ENST00000557918 224 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC005668.1-201ENST00000571142 476 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC090616.5-202ENST00000582111 297 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC009509.4-201ENST00000619202 509 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 Y_RNA.228-201ENST00000364346 98 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 RNU6-272P-201ENST00000411028 104 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 RNA5SP165-201ENST00000517142 115 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC034114.1-201ENST00000520293 285 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC090116.1-201ENST00000615679 446 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AC073308.1-201ENST00000623696 305 ntBASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
CSMD1Q96PZ7 AL589880.1-201ENST00000448271 287 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC245060.5-201ENST00000610778 3293 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 RNU1-124P-201ENST00000363861 145 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 RNU6-1104P-201ENST00000384723 104 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 EIF4EP4-201ENST00000424916 578 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC022690.1-201ENST00000526681 550 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC244023.1-201ENST00000426884 112 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC242498.1-201ENST00000604134 111 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 AC243994.1-201ENST00000618627 109 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CSMD1Q96PZ7 RNU6-654P-201ENST00000364373 107 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 TRGV6-201ENST00000417928 299 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 PAXBP1P1-201ENST00000449315 447 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 AC023050.1-201ENST00000498198 304 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 RNA5SP404-201ENST00000517118 132 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 uc_338.17-201ENST00000619633 179 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 MIR6516-201ENST00000630554 81 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 SNORA25.3-201ENST00000363205 127 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 RNU6-46P-201ENST00000383860 107 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 MTCYBP41-201ENST00000528913 1123 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 AC015849.6-201ENST00000605454 474 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 BPY2DP-201ENST00000422208 265 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 RPL21P66-201ENST00000426566 466 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 RNU6-138P-201ENST00000515952 107 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 SNORA31.13-201ENST00000516624 135 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.11□□□□□ -2.39
CSMD1Q96PZ7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 RNY4P27-201ENST00000363341 96 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 PDCL2P1-201ENST00000419302 352 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 RNU6-1073P-201ENST00000517182 106 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 MIR5571-201ENST00000577998 113 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 MIR4713-201ENST00000582691 75 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AC021171.1-201ENST00000603137 706 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AL355297.3-201ENST00000604082 446 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 MIR4320-201ENST00000636981 65 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 GDI2P1-201ENST00000429312 1336 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 Y_RNA.67-201ENST00000362870 100 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 RNA5SP212-201ENST00000391223 107 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 CYP2C59P-201ENST00000457790 269 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 SETP11-201ENST00000473027 690 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AL590365.1-201ENST00000450788 243 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 SYPL1P1-201ENST00000473622 768 ntBASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD1Q96PZ7 RNU6-348P-201ENST00000384386 107 ntBASIC0.09□□□□□ -2.39
CSMD1Q96PZ7 AC092047.1-201ENST00000424997 240 ntBASIC0.09□□□□□ -2.39
CSMD1Q96PZ7 AC011406.1-201ENST00000512440 370 ntBASIC0.09□□□□□ -2.39
CSMD1Q96PZ7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms