Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC002545.1-201ENST00000592511 181 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-6P-201ENST00000606623 107 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 AL354798.1-201ENST00000622505 329 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 BMS1P21-201ENST00000634565 365 ntBASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNGAP1Q96PV0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNGAP1Q96PV0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNGAP1Q96PV0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SYNGAP1Q96PV0 AC058791.1-201ENST00000608412 3198 ntBASIC4.65□□□□□ -1.66
SYNGAP1Q96PV0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
SYNGAP1Q96PV0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SYNGAP1Q96PV0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNA5SP52-201ENST00000362448 134 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNU5A-1-201ENST00000362698 116 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNA5SP124-201ENST00000362739 110 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-338P-201ENST00000383888 105 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-213P-201ENST00000384051 104 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-708P-201ENST00000384217 107 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AL591034.2-201ENST00000402839 359 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RAB9AP3-201ENST00000412737 573 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 HSPD1P21-201ENST00000436541 245 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 HLA-N-201ENST00000437516 135 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RAB9AP1-201ENST00000449393 573 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AC098869.1-201ENST00000481627 292 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AL049874.1-201ENST00000489560 388 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 SUMO2P6-201ENST00000505273 288 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 MIR892C-201ENST00000516410 77 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AF186190.1-201ENST00000517470 480 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AC026403.1-201ENST00000518938 295 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 ZNF299P-201ENST00000406845 1804 ntBASIC4.65□□□□□ -1.67
SYNGAP1Q96PV0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.65-201ENST00000362846 100 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.105-201ENST00000363182 111 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 U8.8-201ENST00000365399 135 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 MIR301A-201ENST00000385261 86 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 MIR548H3-201ENST00000408771 118 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 AC025445.1-201ENST00000502728 300 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 RNU1-86P-201ENST00000516108 154 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 RNU1-107P-201ENST00000516617 154 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 RNA5SP471-201ENST00000516971 106 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 SNORD84-203ENST00000584275 78 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 AC006557.5-201ENST00000603126 811 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 AC034102.8-201ENST00000615146 484 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 MIR6715A-201ENST00000615929 79 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
SYNGAP1Q96PV0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 MTND5P9-201ENST00000503854 1755 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 TOMM20P4-201ENST00000427861 435 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC092573.2-201ENST00000434546 243 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 RPL29P29-201ENST00000448725 423 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 U8.21-201ENST00000459536 136 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC022493.1-201ENST00000492984 337 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 APOOP4-201ENST00000513530 597 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-1315P-201ENST00000517187 99 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC009314.1-201ENST00000603871 304 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC010900.2-201ENST00000604508 210 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 AC004852.3-201ENST00000614131 326 ntBASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNGAP1Q96PV0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms