Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-217P-201ENST00000384164 104 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 MIR670-201ENST00000390142 98 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 RN7SKP32-201ENST00000410167 303 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AL365400.1-201ENST00000431854 640 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 MTND1P11-201ENST00000456661 876 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 PPP1R2P5-201ENST00000457256 603 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 RNU7-66P-201ENST00000459469 62 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC092185.1-201ENST00000491371 97 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC025755.1-201ENST00000521306 278 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 TRAV37-201ENST00000553906 342 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC026464.5-201ENST00000562497 722 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC005668.1-201ENST00000571142 476 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 MIR3941-201ENST00000582572 103 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC021646.1-201ENST00000605469 484 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC004832.5-201ENST00000608677 401 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AL157817.1-201ENST00000614264 790 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 AC104985.2-201ENST00000620598 500 ntBASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP3Q96JB5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 SNORD113-7-201ENST00000363762 77 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 CD24P4-201ENST00000382840 243 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 RAP1BP3-201ENST00000407180 549 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 RN7SKP27-201ENST00000410684 333 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 RNU2-41P-201ENST00000410991 178 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 NDUFA5P4-201ENST00000436704 385 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 snoU13.28-201ENST00000459235 104 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-329P-201ENST00000459618 107 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 SNORA14.1-201ENST00000516113 141 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC009902.1-201ENST00000519351 183 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 FGF7P1-201ENST00000582820 288 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC005261.5-201ENST00000596280 355 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC002044.1-201ENST00000606707 158 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 FTX_3.1-201ENST00000610451 147 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC019176.2-201ENST00000611579 315 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AL031601.2-202ENST00000622650 282 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC073308.1-201ENST00000623696 305 ntBASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK5RAP3Q96JB5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 RNU1-70P-201ENST00000362618 164 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 RNA5SP119-201ENST00000362715 117 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 SNORD3E-201ENST00000362899 217 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 RNU1-33P-201ENST00000364249 162 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 Y_RNA.356-201ENST00000365475 113 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 MIR7-3-201ENST00000384898 110 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 SNORA48.7-201ENST00000391302 135 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 RPL31P12-201ENST00000422587 358 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AL159987.2-201ENST00000432754 307 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 MTND4LP16-201ENST00000440828 295 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 MRPL50P4-201ENST00000446432 475 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC087884.1-201ENST00000469738 328 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 RPL21P129-201ENST00000491732 478 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 HMGB1P30-201ENST00000492455 606 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC103851.1-201ENST00000506833 274 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-273P-201ENST00000516937 96 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC037471.2-201ENST00000564941 598 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AMZ2P1-203ENST00000565833 850 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 MIR4429-201ENST00000580105 73 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 uc_338.5-201ENST00000611839 155 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 AC022336.2-201ENST00000568966 2538 ntBASIC3.69□□□□□ -1.82
CDK5RAP3Q96JB5 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 MIR412-201ENST00000362142 91 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-270P-201ENST00000364131 105 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-266P-201ENST00000364225 107 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 Y_RNA.263-201ENST00000364659 114 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms