Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU2-23P-201ENST00000410545 195 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AL590135.1-201ENST00000422215 156 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 MRPS18CP6-201ENST00000423587 223 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RPL7P37-201ENST00000425095 738 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RPL7P46-201ENST00000425129 740 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC115115.1-201ENST00000449927 248 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AL353752.1-201ENST00000454946 260 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC021382.1-201ENST00000483523 359 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC022493.2-201ENST00000506122 481 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-189P-201ENST00000516120 101 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC022616.4-201ENST00000522985 181 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC026333.2-201ENST00000542164 106 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 AL606534.2-204ENST00000635008 178 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.26-201ENST00000362539 101 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.180-201ENST00000363867 113 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.477-201ENST00000384352 108 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 SNORA24.1-201ENST00000384401 135 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.518-201ENST00000384552 113 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.576-201ENST00000384781 102 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 MIR483-201ENST00000385070 76 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AL445529.1-201ENST00000398713 389 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 MIR1252-201ENST00000408861 65 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 MTND5P15-201ENST00000434246 349 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 RPS15AP27-201ENST00000449183 343 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC104073.1-201ENST00000451988 151 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 RPL21P13-201ENST00000488305 481 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC068305.1-201ENST00000497406 726 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 RNU2-58P-201ENST00000516403 183 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 SCARNA16.2-201ENST00000516520 172 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 RNA5SP309-201ENST00000516670 106 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 RN7SKP57-201ENST00000517248 293 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 SETP2-201ENST00000553886 926 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 HMGN2P28-201ENST00000606102 262 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AL596245.1-201ENST00000618994 362 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC103858.2-201ENST00000621471 543 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 AC025034.2-201ENST00000623264 286 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SH3RF3Q8TEJ3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SH3RF3Q8TEJ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.09□□□□□ -1.76
SH3RF3Q8TEJ3 AC068647.1-201ENST00000489539 2265 ntBASIC4.09□□□□□ -1.76
SH3RF3Q8TEJ3 AC130650.2-201ENST00000618736 2403 ntBASIC4.09□□□□□ -1.76
SH3RF3Q8TEJ3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RNA5SP258-201ENST00000362750 119 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-774P-201ENST00000363238 107 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-179P-201ENST00000363350 107 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.376-201ENST00000365638 108 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.785-201ENST00000384290 109 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-339P-201ENST00000384310 107 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.515-201ENST00000384535 112 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1127P-201ENST00000384580 107 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AL024474.1-201ENST00000404655 591 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 RN7SKP111-201ENST00000410349 271 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC006989.1-201ENST00000427212 131 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 MTND4LP30-201ENST00000454092 297 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 FCF1P8-201ENST00000510322 597 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC090115.3-201ENST00000553218 849 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 MIR5692C1-201ENST00000585309 91 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 SNRPGP15-201ENST00000600149 222 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 FTX_2.1-201ENST00000618816 94 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 CYP3A51P-201ENST00000633513 256 ntBASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
SH3RF3Q8TEJ3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms