Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 BTF3L4P3-201ENST00000418879 476 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 TIMM9P2-201ENST00000419324 266 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 NANOGP2-201ENST00000435391 727 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC018868.1-201ENST00000491307 315 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC110760.3-202ENST00000515177 371 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 RNU6-150P-201ENST00000516237 95 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC087894.1-201ENST00000538359 518 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AL160236.1-201ENST00000556317 195 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC022254.1-201ENST00000567857 235 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 DUSP12P1-201ENST00000612874 516 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AL158163.2-201ENST00000619110 700 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 LINC02211-204ENST00000642024 1070 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 Z75746.1-201ENST00000440243 2080 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 RNU6-744P-201ENST00000365557 107 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 RNU6-1316P-201ENST00000384242 108 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 SNORA40.2-201ENST00000390847 128 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 RNU2-68P-201ENST00000410878 191 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 MTND4P3-201ENST00000417829 541 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AC010631.1-201ENST00000474150 156 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AC104563.1-201ENST00000476147 376 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 DUXAP5-201ENST00000529668 529 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 DUXAP1-201ENST00000556632 463 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 MTATP6P2-201ENST00000603319 678 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AL161798.1-201ENST00000604630 131 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AL109620.1-201ENST00000618738 1197 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 AC104985.3-201ENST00000623479 597 ntBASIC1.54□□□□□ -2.16
CCDC112Q8NEF3 SNORA63.3-201ENST00000362682 132 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 SNORA25B-201ENST00000365507 128 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL590084.1-201ENST00000407885 387 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 RSU1P2-202ENST00000437884 485 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 FABP5P15-201ENST00000453566 214 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC021451.1-201ENST00000523498 1129 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC090079.2-201ENST00000575289 768 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 MIR4713-201ENST00000582691 75 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 BNIP3P8-201ENST00000597863 560 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 BNIP3P23-201ENST00000599655 511 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.6-201ENST00000603753 252 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.11-201ENST00000604059 253 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.10-201ENST00000604330 253 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC008162.1-201ENST00000604718 254 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.1-201ENST00000604752 252 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.2-201ENST00000604983 252 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.5-201ENST00000605253 252 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.4-201ENST00000605279 254 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.12-201ENST00000605291 253 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.8-201ENST00000605353 252 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.9-201ENST00000605428 253 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL670379.7-201ENST00000605823 252 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC018638.7-201ENST00000605836 1114 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AC124016.2-201ENST00000610058 665 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 AL512427.1-201ENST00000618593 349 ntBASIC1.53□□□□□ -2.16
CCDC112Q8NEF3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
CCDC112Q8NEF3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 Y_RNA.110-201ENST00000363220 99 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 RNU4-51P-201ENST00000364206 140 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 RNA5SP240-201ENST00000365355 128 ntBASIC1.52□□□□□ -2.17
CCDC112Q8NEF3 Y_RNA.578-201ENST00000390903 88 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms