Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL355598.1-201ENST00000604169 202 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC105129.3-201ENST00000605455 485 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC092140.2-201ENST00000618027 521 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 MTND5P42-201ENST00000637720 498 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC006927.3-201ENST00000638789 384 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 MTND4P27-201ENST00000450813 1354 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AL354685.2-201ENST00000448218 1447 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 SNORA4.3-201ENST00000365564 137 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 RNU2-62P-201ENST00000410868 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL030996.1-201ENST00000411430 235 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 MTND2P9-201ENST00000422293 931 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL161651.1-201ENST00000440882 223 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 MTND5P2-201ENST00000442927 1142 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 EPS15P1-201ENST00000448836 336 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 RNU6-1092P-201ENST00000516955 87 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 MTND1P24-201ENST00000552175 861 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC009094.1-201ENST00000564443 426 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC002400.1-201ENST00000569310 726 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AP001981.2-201ENST00000603241 418 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.6-201ENST00000603753 252 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 MTCYBP22-201ENST00000603788 447 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.11-201ENST00000604059 253 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC104763.2-201ENST00000604179 382 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC008162.1-201ENST00000604718 254 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.1-201ENST00000604752 252 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.5-201ENST00000605253 252 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.12-201ENST00000605291 253 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.8-201ENST00000605353 252 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AL670379.7-201ENST00000605823 252 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.15-201ENST00000611544 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.16-201ENST00000613119 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.12-201ENST00000613778 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.20-201ENST00000613956 192 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.9-201ENST00000615427 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.11-201ENST00000616345 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.2-201ENST00000616535 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.3-201ENST00000617785 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 AC006338.1-201ENST00000618453 749 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.19-201ENST00000618602 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 RNU2-1-201ENST00000618664 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.6-201ENST00000619225 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.5-201ENST00000619465 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 U2.10-201ENST00000620268 191 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 Z99571.1-201ENST00000636677 394 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC65Q8IXS2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 RNU6-960P-201ENST00000364056 120 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 RNU6-501P-201ENST00000364072 100 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AC092809.3-201ENST00000415453 231 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 MTND1P12-201ENST00000455231 147 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 TRBV12-1-201ENST00000479785 344 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 RPL23AP94-201ENST00000512518 302 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 RNU2-44P-201ENST00000516795 194 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AP003181.2-201ENST00000528941 181 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AP003122.4-201ENST00000530980 758 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 OR11H5P-201ENST00000554039 926 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AL121821.2-201ENST00000556081 394 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 PCMTD1P2-201ENST00000565017 355 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AC078899.2-201ENST00000595282 212 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 BNIP3P9-201ENST00000603714 553 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms