Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AC034244.1-201ENST00000507687 207 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AC109329.1-201ENST00000518744 317 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AP003066.2-201ENST00000529375 555 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AP000763.2-201ENST00000540641 163 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AL132857.1-201ENST00000555180 708 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 CYP4A27P-201ENST00000567218 190 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AC015688.6-201ENST00000577737 104 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AP003465.2-201ENST00000602571 373 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AL583856.2-201ENST00000606298 543 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AP001596.2-201ENST00000608410 312 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 AP001002.2-201ENST00000625137 386 ntBASIC0.12□□□□□ -2.39
LINC00643Q86TS7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC00643Q86TS7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 RNU2-7P-201ENST00000410794 178 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 PTGES3P1-201ENST00000439531 483 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AC068135.1-201ENST00000446164 246 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 YWHAEP4-201ENST00000505390 198 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AC116337.1-201ENST00000509680 687 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AC080078.3-201ENST00000605407 463 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AL158163.2-201ENST00000619110 700 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AP003400.6-201ENST00000624698 740 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 AC017104.5-201ENST00000637647 639 ntBASIC0.11□□□□□ -2.39
LINC00643Q86TS7 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC00643Q86TS7 RNU6-112P-201ENST00000363599 104 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC00643Q86TS7 U8.10-201ENST00000384260 133 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 RSL24D1P4-201ENST00000400938 484 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 SRIP3-201ENST00000413200 219 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 MTCO2P12-201ENST00000427426 682 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC112771.1-201ENST00000463581 102 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 TRBV12-1-201ENST00000479785 344 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 RNA5SP168-201ENST00000516642 112 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 RNU6-113P-201ENST00000516653 101 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 RNA5SP503-201ENST00000517047 117 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC087441.2-201ENST00000529141 262 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 APOOP3-201ENST00000536787 586 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC025423.5-201ENST00000550230 219 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 ATP5F1P7-201ENST00000567330 760 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC00643Q86TS7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC018618.2-201ENST00000604770 446 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC017083.3-201ENST00000609955 700 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC024257.5-201ENST00000612739 531 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC026634.1-201ENST00000634369 198 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 AC068205.3-201ENST00000636385 468 ntBASIC0.1□□□□□ -2.39
LINC00643Q86TS7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
LINC00643Q86TS7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.39
LINC00643Q86TS7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.09□□□□□ -2.39
LINC00643Q86TS7 RNA5SP499-201ENST00000363982 119 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 LINC01347-201ENST00000417964 355 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 H2AFZP6-201ENST00000444403 394 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 AC010631.1-201ENST00000474150 156 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 RPL30P1-201ENST00000488676 339 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 MIR4435-1-201ENST00000582552 80 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 AC090578.1-201ENST00000604955 591 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 AC068647.2-201ENST00000637380 353 ntBASIC0.09□□□□□ -2.4
LINC00643Q86TS7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
LINC00643Q86TS7 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 RNU6-778P-201ENST00000363269 103 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 RNU6-152P-201ENST00000384037 107 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AL589872.1-201ENST00000426602 288 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AC108667.1-201ENST00000428618 249 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 FTH1P12-201ENST00000432137 551 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AC092628.1-201ENST00000436250 252 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AL441985.1-201ENST00000457727 251 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC00643Q86TS7 UBE2DNL-203ENST00000474922 222 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AC084024.2-201ENST00000503480 791 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 AC117522.2-201ENST00000510049 657 ntBASIC0.08□□□□□ -2.4
LINC00643Q86TS7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC00643Q86TS7 RNU6-1092P-201ENST00000516955 87 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms