| CRTC3 | Q6UUV7 | RNU6-770P-201 | ENST00000363929 | 105 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU2-38P-201 | ENST00000410856 | 79 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC004975.1-201 | ENST00000428733 | 208 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AL358472.1-201 | ENST00000431295 | 329 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | PIGFP3-201 | ENST00000441918 | 722 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | LINC00302-201 | ENST00000444515 | 302 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AL078601.1-201 | ENST00000444542 | 271 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AL121760.1-201 | ENST00000447206 | 346 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC079354.2-201 | ENST00000453523 | 154 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ANP32BP2-201 | ENST00000454525 | 545 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC117465.1-201 | ENST00000457125 | 522 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ATP5J2-209 | ENST00000488775 | 306 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AK3P2-201 | ENST00000507976 | 429 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC099522.1-202 | ENST00000514718 | 367 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | SNORA70.16-201 | ENST00000516390 | 95 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU6-897P-201 | ENST00000517135 | 105 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | TRAPPC2P2-201 | ENST00000517589 | 409 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC021713.1-201 | ENST00000526554 | 510 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | TRAV28-201 | ENST00000557548 | 323 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AL591034.3-201 | ENST00000605511 | 685 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC005046.1-201 | ENST00000608515 | 625 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC243829.7-201 | ENST00000633081 | 225 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | CCDC14-217 | ENST00000485727 | 7917 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | DLG1-217 | ENST00000452595 | 3053 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | MBNL1-211 | ENST00000463374 | 5092 nt | APPRIS P4 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | PTAR1-202 | ENST00000377200 | 9876 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | FAM208A-202 | ENST00000431842 | 7119 nt | TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ADAM29-201 | ENST00000359240 | 3325 nt | APPRIS P1 TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ZNF43-210 | ENST00000598381 | 3004 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | PLAG1-201 | ENST00000316981 | 7322 nt | APPRIS P1 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | SEL1L2-202 | ENST00000378072 | 1892 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | UTRN-204 | ENST00000367545 | 12339 nt | APPRIS P1 TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | Y_RNA.14-201 | ENST00000362415 | 103 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | Y_RNA.19-201 | ENST00000362462 | 99 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | U3.6-201 | ENST00000363622 | 211 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | GTSF1L-202 | ENST00000373005 | 459 nt | APPRIS ALT2 TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | Y_RNA.471-201 | ENST00000384312 | 102 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | MIR708-201 | ENST00000390708 | 88 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC010745.2-201 | ENST00000420404 | 839 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC139712.2-201 | ENST00000424302 | 339 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | TAB3-AS1-201 | ENST00000428263 | 245 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC092573.2-202 | ENST00000437243 | 336 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC112715.1-201 | ENST00000445534 | 350 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AL645939.1-201 | ENST00000453429 | 797 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | KC877373.1-201 | ENST00000479066 | 408 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC092440.1-201 | ENST00000512563 | 571 nt | TSL 4 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU6-397P-201 | ENST00000516226 | 104 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | SNORA31.8-201 | ENST00000516327 | 108 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC005476.1-201 | ENST00000554427 | 397 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC018904.1-201 | ENST00000560594 | 542 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RN7SL600P-201 | ENST00000581811 | 299 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC087749.2-201 | ENST00000583910 | 352 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC007390.2-201 | ENST00000606229 | 3803 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC141273.2-201 | ENST00000618989 | 130 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | XIRP2-204 | ENST00000409273 | 12269 nt | TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | SMG1P1-206 | ENST00000431681 | 2913 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | LINC01828-203 | ENST00000452716 | 3250 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | FEZ2-201 | ENST00000305852 | 1782 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RANBP2-201 | ENST00000283195 | 11711 nt | APPRIS P1 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | DDX60L-201 | ENST00000260184 | 6754 nt | APPRIS P1 TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | TJP1-204 | ENST00000400011 | 6764 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ANO3-204 | ENST00000531568 | 3117 nt | APPRIS ALT2 TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | PCDH11X-206 | ENST00000373097 | 9146 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | MAP3K21-201 | ENST00000366622 | 4005 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ECT2-211 | ENST00000441497 | 2825 nt | APPRIS P2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ADGRL2-208 | ENST00000370725 | 5293 nt | APPRIS ALT2 TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | UBE4A-201 | ENST00000252108 | 6103 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ADAM7-201 | ENST00000175238 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNA5SP388-201 | ENST00000362584 | 119 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | Y_RNA.64-201 | ENST00000362845 | 102 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | SNORA7.2-201 | ENST00000364446 | 145 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU6-611P-201 | ENST00000384276 | 104 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU4-70P-201 | ENST00000384579 | 139 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | MTCYBP2-201 | ENST00000407745 | 171 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNA5SP317-201 | ENST00000410176 | 116 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNA5SP311-201 | ENST00000411290 | 116 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RAC1P3-201 | ENST00000416129 | 580 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC098614.2-201 | ENST00000426040 | 255 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | LINC00448-201 | ENST00000438352 | 402 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | HMGN2P21-201 | ENST00000447764 | 270 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | NUTF2P7-201 | ENST00000453086 | 375 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC092798.1-201 | ENST00000458542 | 409 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RPS29P27-201 | ENST00000463711 | 170 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RPL39P38-201 | ENST00000467018 | 153 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | WDR49-207 | ENST00000479765 | 2108 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC139453.3-201 | ENST00000493276 | 369 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC025465.3-201 | ENST00000510570 | 311 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNA5SP315-201 | ENST00000516340 | 116 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNA5SP312-201 | ENST00000517068 | 116 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | RNA5SP165-201 | ENST00000517142 | 115 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AF233439.1-201 | ENST00000526235 | 401 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC084816.1-207 | ENST00000538317 | 584 nt | TSL 4 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | AC013565.1-201 | ENST00000565938 | 597 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CRTC3 | Q6UUV7 | ZYXP1-201 | ENST00000617638 | 118 nt | BASIC | 4.11 | □□□□□ -1.75 | | |