Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 ZNF658B-202ENST00000615961 3375 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 Y_RNA.201-201ENST00000364052 96 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 RNU6-72P-201ENST00000384285 79 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 SNORD116-20-201ENST00000384529 92 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 Y_RNA.576-201ENST00000384781 102 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 COTL1P1-201ENST00000422309 375 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 RPS6P15-201ENST00000431996 751 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL022238.1-201ENST00000442557 355 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC027673.1-201ENST00000456245 405 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC097462.2-201ENST00000504623 481 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 SNORA9.3-201ENST00000516383 129 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 Y_RNA.687-201ENST00000516558 91 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 SNORA18.6-201ENST00000516792 115 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AP004607.1-201ENST00000524456 203 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC009127.3-201ENST00000570531 403 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 MIR5692A1-201ENST00000580523 69 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AC009233.1-201ENST00000616477 371 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 AP003485.2-201ENST00000623636 610 ntBASIC2.52□□□□□ -2.01
C11orf88Q6PI97 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C11orf88Q6PI97 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 U3.4-201ENST00000363352 213 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 SNORA62.1-201ENST00000364287 154 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 SNORD14B-201ENST00000364533 90 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 RNU6-1032P-201ENST00000384100 107 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AL590004.2-201ENST00000404787 371 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 CALM1P1-201ENST00000442082 433 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC124916.1-201ENST00000444020 547 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 CYP2C59P-201ENST00000457790 269 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC018437.1-201ENST00000492214 406 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC008526.1-201ENST00000509149 338 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 RNU6-410P-201ENST00000517006 107 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 FAM92A1P1-201ENST00000528023 890 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 PSMA3P-201ENST00000555485 635 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 RPS3AP23-202ENST00000574601 686 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AL138889.2-201ENST00000603883 242 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC093648.1-201ENST00000623546 606 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 AC026422.1-201ENST00000623961 452 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 MIR3529-201ENST00000637713 78 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 FARSBP1-201ENST00000435808 1778 ntBASIC2.51□□□□□ -2.01
C11orf88Q6PI97 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RNU6-1287P-201ENST00000362914 107 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 SNORA71.1-201ENST00000364523 117 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RNU6-851P-201ENST00000384565 107 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RNU6-1060P-201ENST00000384664 107 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 MIR181A2-201ENST00000384863 110 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 MIR144-201ENST00000384886 86 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 AC000111.3-201ENST00000433478 193 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 GPR143P-201ENST00000434155 205 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 AP000705.1-201ENST00000454567 350 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RPL9P33-201ENST00000484311 566 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 AC090572.1-201ENST00000519251 160 ntBASIC2.5□□□□□ -2.01
C11orf88Q6PI97 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
C11orf88Q6PI97 AC022080.3-201ENST00000544433 482 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms