Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 SNORD27-201ENST00000363981 72 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-371P-201ENST00000364283 108 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-596P-201ENST00000365395 98 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 Y_RNA.416-201ENST00000384014 113 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-629P-201ENST00000384061 103 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 SNORA51.11-201ENST00000384442 131 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RNVU1-14-201ENST00000384770 164 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 MIR218-2-201ENST00000385006 110 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 SNORD73A-201ENST00000386062 65 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RNU2-33P-201ENST00000410344 192 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 AP000275.1-201ENST00000411943 390 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RPL21P38-201ENST00000418090 167 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 AL160275.3-201ENST00000423876 471 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RPS6P12-201ENST00000432491 726 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RANP8-201ENST00000444720 713 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 AC073587.1-201ENST00000447093 876 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 RPS3AP46-201ENST00000448352 682 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 Y_RNA.700-201ENST00000516806 100 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 VN1R91P-201ENST00000594377 169 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 AC174048.1-201ENST00000603389 144 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 AC104763.2-201ENST00000604179 382 ntBASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNY1P16-201ENST00000363063 111 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 Y_RNA.274-201ENST00000364714 101 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNA5SP51-201ENST00000364750 119 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-746P-201ENST00000384112 109 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-187P-201ENST00000384139 106 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-190P-201ENST00000384154 102 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 MIR199A2-201ENST00000385289 110 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 FTH1P6-201ENST00000430768 320 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 NEFMP1-201ENST00000443423 1006 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 CYCSP35-201ENST00000451978 304 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AP000873.1-201ENST00000463987 400 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RN7SKP60-201ENST00000516985 239 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 SNORA31.20-201ENST00000517111 133 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC109329.1-201ENST00000518744 317 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC022695.1-201ENST00000522089 237 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC244505.7-201ENST00000599675 272 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC004792.1-201ENST00000614523 137 ntBASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNKSR3Q6P9H4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AL049781.1-201ENST00000623195 3585 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-212P-201ENST00000362642 104 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 RNU4-50P-201ENST00000364361 141 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 RNA5SP239-201ENST00000410218 129 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AC008264.1-201ENST00000447612 367 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 NDUFB1P2-201ENST00000449477 176 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AL139109.1-201ENST00000455491 297 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AC010285.1-201ENST00000470580 392 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AC098869.1-201ENST00000481627 292 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-85P-201ENST00000605989 107 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 MIR1244-1-201ENST00000612829 85 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 AP001282.2-201ENST00000616149 309 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 MIR1244-3-201ENST00000635744 85 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 MIR1244-2-201ENST00000636449 85 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms