Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC090116.1-201ENST00000615679 446 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AL121890.5-201ENST00000620848 304 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 Y_RNA.294-201ENST00000364916 102 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 RNU6-35P-201ENST00000384530 107 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AC000111.3-201ENST00000433478 193 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 RPL30P7-201ENST00000479312 323 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 SNORA4.4-201ENST00000515921 135 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 SNORA31.6-201ENST00000516241 130 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AC025857.1-201ENST00000525252 377 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AP006587.4-201ENST00000526053 529 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AC090115.3-201ENST00000553218 849 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 AC083865.1-201ENST00000636634 831 ntBASIC0.68□□□□□ -2.3
CCDC18Q5T9S5 RNU6-26P-201ENST00000383985 107 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 RNA5SP63-201ENST00000391225 112 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 TAF9BP2-201ENST00000400856 499 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC013410.2-201ENST00000422627 201 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 FTH1P12-201ENST00000432137 551 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC112492.4-201ENST00000456549 352 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 SNORA62.5-201ENST00000516634 120 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AL391261.3-201ENST00000557194 520 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 MIR8074-201ENST00000615081 81 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 MIR325-201ENST00000385260 98 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 UBE2V1P4-201ENST00000425374 344 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC023512.1-201ENST00000444513 499 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 snoU13.9-201ENST00000458927 103 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 MTCYBP16-201ENST00000509187 1129 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC138473.1-201ENST00000605717 526 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AL121652.1-201ENST00000608851 448 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AC008498.1-201ENST00000613012 531 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 AL391597.1-201ENST00000618707 694 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 U1.36-201ENST00000620684 176 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.67□□□□□ -2.3
CCDC18Q5T9S5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AC111193.1-201ENST00000504097 155 ntBASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AC010615.3-201ENST00000597319 394 ntBASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AC004492.1-201ENST00000607036 742 ntBASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC18Q5T9S5 AL391516.1-201ENST00000554380 2449 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 MIR1290-201ENST00000408735 78 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 RNU2-36P-201ENST00000410361 191 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AL512844.2-201ENST00000433990 593 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 HMGN2P9-201ENST00000476875 229 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AL359212.1-201ENST00000556608 614 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AC021739.1-201ENST00000559631 174 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AC026271.5-201ENST00000577873 130 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AC068787.1-201ENST00000623908 691 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 AC067863.3-201ENST00000624172 122 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 MTND5P30-201ENST00000452896 1731 ntBASIC0.65□□□□□ -2.31
CCDC18Q5T9S5 ZNF680P1-201ENST00000436625 1469 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 RNU6-271P-201ENST00000363858 105 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 RNU4-31P-201ENST00000384211 141 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 RNU2-70P-201ENST00000410718 179 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC009518.2-201ENST00000418056 731 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 PIGFP2-201ENST00000421400 651 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC109927.2-201ENST00000506416 303 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC093510.2-201ENST00000562820 896 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC010900.2-201ENST00000604508 210 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 AC073968.1-201ENST00000618594 637 ntBASIC0.64□□□□□ -2.31
CCDC18Q5T9S5 OR5T3-201ENST00000303059 1023 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 RNA5SP327-201ENST00000362494 101 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 RNA5SP240-201ENST00000365355 128 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 SNORA50A-201ENST00000384225 134 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 RNU2-49P-201ENST00000410666 184 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 HMGN1P10-201ENST00000474557 553 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 AP001025.1-201ENST00000486139 332 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 AP003034.1-201ENST00000534621 422 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 AC005832.3-201ENST00000537929 631 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 RAB11AP2-201ENST00000545905 639 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 LINC00557-201ENST00000563184 1279 ntBASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC18Q5T9S5 AC009974.1-201ENST00000608881 455 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms