| CTSL3P | Q5NE16 | MTND4P2-201 | ENST00000507767 | 1203 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | OCIAD1-AS1-201 | ENST00000513576 | 265 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | DEUP1-203 | ENST00000527307 | 767 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AP002770.2-201 | ENST00000543613 | 532 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC090531.1-202 | ENST00000548450 | 499 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC091544.4-201 | ENST00000555268 | 342 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MIR4435-1-201 | ENST00000582552 | 80 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC099566.1-211 | ENST00000595188 | 737 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU6-91P-201 | ENST00000607774 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | TUSC7.1-201 | ENST00000610969 | 165 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | Y_RNA.783-201 | ENST00000613546 | 102 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC009090.3-201 | ENST00000616553 | 565 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC244517.5-202 | ENST00000623741 | 500 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | LRRCC1-202 | ENST00000414626 | 4493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | IDE-201 | ENST00000265986 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | SNORA4.3-201 | ENST00000365564 | 137 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU6-395P-201 | ENST00000365662 | 106 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU6-166P-201 | ENST00000384371 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNA5SP425-201 | ENST00000410336 | 112 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU2-2P-201 | ENST00000410396 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC009518.2-201 | ENST00000418056 | 731 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC012370.1-201 | ENST00000419244 | 530 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RPS15AP12-201 | ENST00000419498 | 388 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U51244.1-201 | ENST00000423120 | 374 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AL160275.3-201 | ENST00000423876 | 471 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC027124.2-201 | ENST00000428249 | 105 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | GHRL-208 | ENST00000439975 | 326 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | GDI2P2-201 | ENST00000445131 | 608 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | KCNQ5-IT1-201 | ENST00000445310 | 563 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | FABP5P13-201 | ENST00000452144 | 328 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC010976.1-211 | ENST00000454503 | 644 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | PCDH9-AS4-201 | ENST00000456459 | 436 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC117522.2-201 | ENST00000510049 | 657 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC107934.1-201 | ENST00000522215 | 217 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC025871.1-201 | ENST00000523935 | 443 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MTND4LP18-201 | ENST00000526864 | 291 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MYL12A-202 | ENST00000536605 | 899 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC018410.2-201 | ENST00000540410 | 610 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | PSMA3P-201 | ENST00000555485 | 635 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MIR1273C-201 | ENST00000578669 | 77 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MYL12A-209 | ENST00000580887 | 899 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MIR4513-201 | ENST00000581077 | 86 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC005357.2-201 | ENST00000586473 | 583 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC078899.2-201 | ENST00000595282 | 212 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC020910.1-201 | ENST00000599404 | 413 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC174048.1-201 | ENST00000603389 | 144 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AP000811.1-201 | ENST00000603803 | 651 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC009314.1-201 | ENST00000603871 | 304 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC107952.2-201 | ENST00000606048 | 486 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC103710.2-201 | ENST00000609912 | 942 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.15-201 | ENST00000611544 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC245297.3-203 | ENST00000612135 | 405 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.16-201 | ENST00000613119 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.12-201 | ENST00000613778 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.20-201 | ENST00000613956 | 192 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.9-201 | ENST00000615427 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.11-201 | ENST00000616345 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.2-201 | ENST00000616535 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.3-201 | ENST00000617785 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.19-201 | ENST00000618602 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU2-1-201 | ENST00000618664 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.6-201 | ENST00000619225 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.5-201 | ENST00000619465 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | U2.10-201 | ENST00000620268 | 191 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | CAPZA2-214 | ENST00000628758 | 525 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | PTPRQ-209 | ENST00000616559 | 8165 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | SNX10-209 | ENST00000619420 | 2361 nt | APPRIS ALT1 TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC107029.2-201 | ENST00000462011 | 2305 nt | TSL 2 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU6-858P-201 | ENST00000362436 | 107 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AL445529.1-201 | ENST00000398713 | 389 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | DEFB130A-201 | ENST00000400079 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RPL23AP39-201 | ENST00000415533 | 405 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AL139413.1-201 | ENST00000421309 | 217 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | EDNRB-AS1-201 | ENST00000422405 | 601 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC241644.2-201 | ENST00000426504 | 480 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | DEFB130B-201 | ENST00000437818 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | GPM6BP3-201 | ENST00000442797 | 145 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | DPP10-AS2-201 | ENST00000446992 | 624 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AL353705.4-201 | ENST00000449661 | 238 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | MTND1P12-201 | ENST00000455231 | 147 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC055731.1-201 | ENST00000474387 | 401 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC090255.1-201 | ENST00000495779 | 349 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | ANXA2P1-201 | ENST00000505539 | 926 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC016556.1-201 | ENST00000510004 | 935 nt | TSL 2 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC008869.1-201 | ENST00000510938 | 442 nt | TSL 2 BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC010486.1-201 | ENST00000511793 | 424 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | RNU6-678P-201 | ENST00000516832 | 109 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CTSL3P | Q5NE16 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 2 | □□□□□ -2.09 | | |