Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC020895.1-201ENST00000595362 272 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AL451007.1-201ENST00000595491 289 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC011494.1-201ENST00000596454 237 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC018889.1-201ENST00000605372 397 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC015813.4-201ENST00000610469 179 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC012442.3-202ENST00000636742 206 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 AC007496.3-201ENST00000624987 3443 ntBASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.94□□□□□ -1.78
FNDC3BQ53EP0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MIR448-201ENST00000362131 111 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 RNU6-78P-201ENST00000362897 107 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 RNU6-527P-201ENST00000363425 104 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AL513475.1-201ENST00000406602 315 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AL117339.3-201ENST00000418733 162 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 USMG5P1-201ENST00000425964 177 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AC083863.1-201ENST00000438811 231 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 DAP3P1-201ENST00000441522 278 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 FTH1P25-201ENST00000447665 469 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AC125238.1-201ENST00000448842 249 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 CEACAMP4-201ENST00000457676 421 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MIR2053-201ENST00000459295 91 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.631-201ENST00000459607 101 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AC133134.1-201ENST00000466800 359 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 RPL23AP49-201ENST00000492925 468 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MIR4273-201ENST00000582824 84 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MIR3976-201ENST00000606807 139 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 AL138880.2-201ENST00000616214 239 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FNDC3BQ53EP0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 U1.1-201ENST00000384101 164 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 RNU6-890P-201ENST00000384121 107 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 U8.11-201ENST00000384699 133 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 U8.12-201ENST00000384701 133 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 RNU6-331P-201ENST00000384724 107 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 MIR521-1-201ENST00000384902 87 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 MIR559-201ENST00000385188 96 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 RNA5SP38-201ENST00000410750 119 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 RAB9AP3-201ENST00000412737 573 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AL139247.1-201ENST00000422768 325 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AL591419.1-201ENST00000427423 339 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC087650.1-201ENST00000431445 468 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 MTCYBP6-201ENST00000441810 138 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC124916.1-201ENST00000444020 547 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 RAB9AP1-201ENST00000449393 573 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 U8.18-201ENST00000459285 133 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC114801.2-201ENST00000503825 781 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC025554.1-201ENST00000505641 188 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 MIR4444-1-201ENST00000581696 74 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC005899.2-201ENST00000584353 90 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 MIR4444-2-201ENST00000584390 74 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AC011890.2-201ENST00000613393 294 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 U4.7-201ENST00000638126 106 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 LINC02471-203ENST00000641941 4752 ntBASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FNDC3BQ53EP0 AL161912.2-201ENST00000565707 3007 ntBASIC3.91□□□□□ -1.78
FNDC3BQ53EP0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FNDC3BQ53EP0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.91□□□□□ -1.78
FNDC3BQ53EP0 RNU6-858P-201ENST00000362436 107 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms