Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL592114.1-201ENST00000403842 483 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 PRPS1P1-201ENST00000445305 876 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 RN7SL75P-201ENST00000461926 281 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 AC079140.5-201ENST00000507882 310 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 AC113155.1-201ENST00000511141 769 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 MTND1P5-201ENST00000517906 940 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 AL121821.2-201ENST00000556081 394 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 MIR5583-1-201ENST00000580941 59 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 AC008739.2-201ENST00000597006 317 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 DISC2.1-201ENST00000612827 205 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 UCA1.1-201ENST00000620952 75 ntBASIC3.34□□□□□ -1.87
CCDC38Q502W7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CCDC38Q502W7 MTND4P5-201ENST00000435821 1374 ntBASIC3.34□□□□□ -1.88
CCDC38Q502W7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC38Q502W7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC38Q502W7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.34□□□□□ -1.88
CCDC38Q502W7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CCDC38Q502W7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CCDC38Q502W7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC38Q502W7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC092435.3-201ENST00000565538 3654 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC38Q502W7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 RNU2-3P-201ENST00000410144 191 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AL358075.3-201ENST00000426289 226 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AL161651.1-201ENST00000440882 223 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC091885.1-201ENST00000506658 268 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC007151.1-201ENST00000572774 483 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC38Q502W7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC069234.5-201ENST00000611056 416 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC092794.1-201ENST00000612734 582 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 AL031601.2-202ENST00000622650 282 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AC091903.1-201ENST00000624322 454 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 AP003400.5-201ENST00000624827 617 ntBASIC3.33□□□□□ -1.88
CCDC38Q502W7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC38Q502W7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC38Q502W7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC38Q502W7 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 RNY3P3-201ENST00000363816 102 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 SNORA26.7-201ENST00000391288 122 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 RPS4XP7-201ENST00000406274 780 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 MIR1289-1-201ENST00000408836 144 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 CYCSP33-201ENST00000414485 327 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC38Q502W7 CYCSP35-201ENST00000451978 304 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AC233279.1-201ENST00000455300 423 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AL121769.1-201ENST00000469473 401 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 RPL38P4-201ENST00000502376 214 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC38Q502W7 MTND1P35-201ENST00000526739 508 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC38Q502W7 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 AL035413.2-201ENST00000604801 525 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 U2.17-201ENST00000611454 95 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 MIR3688-2-201ENST00000636963 87 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC38Q502W7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.32□□□□□ -1.88
CCDC38Q502W7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC38Q502W7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC38Q502W7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC38Q502W7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC38Q502W7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU4-66P-201ENST00000365199 138 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU6-38P-201ENST00000384085 107 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 SNORD115-47-201ENST00000391226 86 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 BTF3P7-201ENST00000407097 488 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 U3.37-201ENST00000408528 213 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC016831.2-201ENST00000417179 352 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms