| NDUFA9 | Q16795 | IGHVIII-5-1-201 | ENST00000523059 | 99 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC022616.3-201 | ENST00000523940 | 148 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC100768.1-201 | ENST00000525512 | 506 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL157871.3-201 | ENST00000557231 | 293 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL158211.1-201 | ENST00000566763 | 763 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR1273C-201 | ENST00000578669 | 77 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC005771.1-201 | ENST00000585581 | 349 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL356280.1-201 | ENST00000603614 | 379 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL158032.1-201 | ENST00000605401 | 106 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | ZRANB2-AS2-218 | ENST00000608360 | 722 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC011890.2-201 | ENST00000613393 | 294 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | CU459211.1-201 | ENST00000635667 | 749 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | CASC1-205 | ENST00000545133 | 2146 nt | APPRIS ALT2 TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SLC39A10-201 | ENST00000359634 | 5322 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC004944.1-201 | ENST00000517807 | 3059 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | CCDC66-201 | ENST00000326595 | 3027 nt | APPRIS P3 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | U8.3-201 | ENST00000363321 | 132 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNY4P34-201 | ENST00000364779 | 95 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SNORA20.2-201 | ENST00000383922 | 131 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU6-1072P-201 | ENST00000384703 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU6-443P-201 | ENST00000384780 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR558-201 | ENST00000384920 | 94 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR524-201 | ENST00000385242 | 87 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC127391.1-201 | ENST00000411737 | 98 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MTND2P18-201 | ENST00000419962 | 1030 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SLC44A3-AS1-205 | ENST00000424505 | 612 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL590730.1-201 | ENST00000426283 | 398 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL592466.1-201 | ENST00000428346 | 307 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | HTR2A-AS1-201 | ENST00000430913 | 429 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | OPA1-AS1-201 | ENST00000433105 | 492 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC025038.1-201 | ENST00000433249 | 336 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC091133.1-201 | ENST00000435491 | 483 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC104850.1-201 | ENST00000435940 | 476 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC117386.2-202 | ENST00000472821 | 522 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MTND3P7-201 | ENST00000474435 | 343 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | PLCXD2-AS1-201 | ENST00000493131 | 491 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC098862.1-201 | ENST00000504991 | 413 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | LINC01256-201 | ENST00000513270 | 508 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU6-1220P-201 | ENST00000517126 | 108 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC103957.1-201 | ENST00000517681 | 503 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC113145.1-201 | ENST00000522408 | 412 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL512310.1-201 | ENST00000548639 | 172 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | LINC00933-203 | ENST00000559812 | 219 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC007610.2-201 | ENST00000566770 | 666 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SNORD53-201 | ENST00000579969 | 78 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL133173.2-201 | ENST00000614270 | 90 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC008250.2-201 | ENST00000615261 | 205 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC108479.2-201 | ENST00000617314 | 601 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR6134-201 | ENST00000617606 | 109 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR203B-201 | ENST00000636080 | 86 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC010329.5-201 | ENST00000623497 | 2174 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | LIPJ-201 | ENST00000371939 | 1484 nt | APPRIS P1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | TEX21P-201 | ENST00000447107 | 1476 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | ANKRD36BP1-202 | ENST00000604892 | 1417 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | KIF20B-202 | ENST00000371728 | 6419 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | Y_RNA.33-201 | ENST00000362591 | 102 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNY1P12-201 | ENST00000364251 | 105 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | TSHB-202 | ENST00000369517 | 474 nt | APPRIS P1 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RPAP3-202 | ENST00000380650 | 2149 nt | TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SNORA40.3-201 | ENST00000390964 | 122 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SNORA40C-201 | ENST00000391285 | 128 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | ZNF705D-201 | ENST00000400078 | 925 nt | APPRIS P1 TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU2-39P-201 | ENST00000410604 | 198 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | HMGN1P14-201 | ENST00000412459 | 517 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | NPM1P11-201 | ENST00000417106 | 855 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC009299.3-201 | ENST00000421122 | 1072 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC013401.1-202 | ENST00000422017 | 626 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | PTGES3P4-201 | ENST00000426243 | 356 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL512656.1-201 | ENST00000427492 | 401 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL356320.1-201 | ENST00000429616 | 163 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL024508.1-201 | ENST00000432477 | 505 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RPS15AP28-201 | ENST00000435088 | 386 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL133481.3-201 | ENST00000456546 | 333 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC090096.1-201 | ENST00000489168 | 390 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC108078.2-201 | ENST00000510750 | 236 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | LNX1-AS1-202 | ENST00000510785 | 550 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SKP1-203 | ENST00000517625 | 876 nt | APPRIS P4 TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MTCYBP20-201 | ENST00000524239 | 1129 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | PRELID2P1-201 | ENST00000552837 | 301 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL133368.2-201 | ENST00000556978 | 386 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | LINC01491-201 | ENST00000558434 | 505 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC007948.1-201 | ENST00000581632 | 242 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR3616-201 | ENST00000584070 | 92 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | NRBF2P1-201 | ENST00000587407 | 859 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | LINC01533-205 | ENST00000593056 | 607 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AC008121.1-201 | ENST00000603244 | 268 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | AL359547.2-201 | ENST00000615810 | 418 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RICTOR-202 | ENST00000357387 | 9543 nt | APPRIS P1 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | DPY19L2P1-203 | ENST00000458672 | 3347 nt | TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | OR5M1-202 | ENST00000641076 | 4302 nt | APPRIS P1 BASIC | 2.18 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | Y_RNA.22-201 | ENST00000362492 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU6-1280P-201 | ENST00000365211 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU6-898P-201 | ENST00000365627 | 104 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | RNU6-641P-201 | ENST00000384006 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| NDUFA9 | Q16795 | SNORA75B-201 | ENST00000384053 | 137 nt | BASIC | 2.18 | □□□□□ -2.06 | | |