Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 BBIP1P1-201ENST00000602999 279 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 CYP2C61P-201ENST00000604072 290 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN3Q15651 MIR3199-2-201ENST00000636243 86 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
HMGN3Q15651 MIR302D-201ENST00000362275 68 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 SNORD114-22-201ENST00000365423 72 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
HMGN3Q15651 RNU6-741P-201ENST00000383889 107 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 MIR1267-201ENST00000408723 78 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 RNU2-47P-201ENST00000410649 186 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 AL512637.2-201ENST00000431287 1256 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 AC027119.1-201ENST00000440877 241 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN3Q15651 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.4□□□□□ -2.35
HMGN3Q15651 AC124293.1-201ENST00000530034 493 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGN3Q15651 AP005229.2-201ENST00000609980 697 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 AC099654.5-201ENST00000636479 350 ntBASIC0.4□□□□□ -2.35
HMGN3Q15651 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.4□□□□□ -2.35
HMGN3Q15651 AC138393.1-203ENST00000327086 343 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HMGN3Q15651 AC097463.2-201ENST00000421074 142 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AC018630.2-202ENST00000422992 927 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN3Q15651 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGN3Q15651 AC098831.1-201ENST00000440661 216 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGN3Q15651 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGN3Q15651 COPS8P3-201ENST00000526024 482 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN3Q15651 LSM6P2-201ENST00000552208 177 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 SNORA77B-201ENST00000578179 125 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 MIR3937-201ENST00000580135 106 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AL713866.2-201ENST00000603579 219 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AL391646.1-201ENST00000603860 190 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGN3Q15651 BX284668.6-201ENST00000606899 438 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 AC117490.2-201ENST00000610042 594 ntBASIC0.39□□□□□ -2.35
HMGN3Q15651 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
HMGN3Q15651 MIR1262-201ENST00000408276 93 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 PNRC2P1-201ENST00000423940 420 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 ZYG11AP1-201ENST00000430329 837 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 RPL22P13-201ENST00000493291 347 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 ATP5EP1-201ENST00000510257 156 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 SNORD116-28-201ENST00000516123 91 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 RNU6-197P-201ENST00000516680 100 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 MIR3167-201ENST00000579623 85 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 AC005786.1-201ENST00000588553 154 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 BNIP3P23-201ENST00000599655 511 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AL031176.1-201ENST00000604554 466 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGN3Q15651 AC092953.2-201ENST00000608000 699 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 AC027335.2-201ENST00000624030 375 ntBASIC0.38□□□□□ -2.35
HMGN3Q15651 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGN3Q15651 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
HMGN3Q15651 RNU6-707P-201ENST00000364647 95 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 MIR506-201ENST00000384998 124 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 LINC01347-201ENST00000417964 355 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.37□□□□□ -2.35
HMGN3Q15651 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN3Q15651 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
HMGN3Q15651 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN3Q15651 RFC5P1-201ENST00000454419 874 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 RPS29P1-201ENST00000465274 159 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 BET1P1-201ENST00000482276 359 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN3Q15651 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.37□□□□□ -2.35
HMGN3Q15651 FABP5P5-201ENST00000515537 406 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 RNVU1-2-201ENST00000516326 135 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.37□□□□□ -2.35
HMGN3Q15651 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.37□□□□□ -2.35
HMGN3Q15651 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGN3Q15651 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN3Q15651 CR383656.7-201ENST00000548164 174 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGN3Q15651 MIR4781-201ENST00000585250 76 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGN3Q15651 AL512605.2-201ENST00000592972 256 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 MIR6504-201ENST00000613520 61 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 AC091965.5-201ENST00000624785 342 ntBASIC0.37□□□□□ -2.35
HMGN3Q15651 RNU5E-1-201ENST00000362477 120 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 RNU6-414P-201ENST00000363705 104 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AL109755.1-201ENST00000401791 649 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGN3Q15651 CBX3P6-201ENST00000430257 527 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AC068135.1-201ENST00000446164 246 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 HMGN3P1-201ENST00000453847 193 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGN3Q15651 AC087477.1-201ENST00000465747 340 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 AC010409.1-201ENST00000487382 476 ntBASIC0.36□□□□□ -2.35
HMGN3Q15651 BOLA3P3-201ENST00000505182 232 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms