Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC116337.1-201ENST00000509680 687 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX6-1P78426 RNU6-377P-201ENST00000515965 102 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 SNORA70.14-201ENST00000516205 110 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AP004607.1-201ENST00000524456 203 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX6-1P78426 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX6-1P78426 MIR5690-201ENST00000583739 73 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AL451007.1-201ENST00000595491 289 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AC064836.2-201ENST00000609491 462 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AC096577.2-201ENST00000611455 153 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AC004852.3-201ENST00000614131 326 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AL161629.2-201ENST00000615347 275 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AC126177.8-201ENST00000618339 1015 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AL034408.1-202ENST00000636088 415 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 MIR3199-2-201ENST00000636243 86 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX6-1P78426 AC110491.1-201ENST00000562191 2010 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX6-1P78426 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX6-1P78426 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
NKX6-1P78426 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
NKX6-1P78426 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NKX6-1P78426 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NKX6-1P78426 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX6-1P78426 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX6-1P78426 AC007496.3-201ENST00000624987 3443 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX6-1P78426 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
NKX6-1P78426 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX6-1P78426 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX6-1P78426 Y_RNA.259-201ENST00000364619 101 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 Y_RNA.813-201ENST00000364639 102 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 Z98749.2-208ENST00000381646 500 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 RNU6-933P-201ENST00000384424 107 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 MIR30B-201ENST00000384850 88 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC016831.2-201ENST00000417179 352 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 ATG3P1-201ENST00000419507 911 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 BPY2DP-201ENST00000422208 265 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 SAR1AP4-201ENST00000429225 591 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC091286.1-201ENST00000431233 461 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX6-1P78426 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC025554.1-201ENST00000505641 188 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 SNORA74D-201ENST00000516404 141 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC026403.1-201ENST00000518938 295 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC010186.2-204ENST00000537668 439 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC091516.1-201ENST00000549191 703 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX6-1P78426 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX6-1P78426 AC019193.3-201ENST00000609144 554 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AL442067.2-201ENST00000614033 363 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 MIR6134-201ENST00000617606 109 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AC244517.12-201ENST00000623581 663 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 AL359757.2-201ENST00000624309 274 ntBASIC3.46□□□□□ -1.86
NKX6-1P78426 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX6-1P78426 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NKX6-1P78426 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX6-1P78426 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NKX6-1P78426 AC233263.6-201ENST00000631132 1963 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 RNU6-370P-201ENST00000411008 104 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AC245054.2-201ENST00000415639 319 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 TBCAP1-201ENST00000436520 327 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 SETP5-201ENST00000437270 562 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 CYCSP32-201ENST00000440548 321 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AC125238.1-201ENST00000448842 249 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 NIPA2P5-201ENST00000452282 464 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 PCMTD1P1-201ENST00000455560 355 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX6-1P78426 RNU7-23P-201ENST00000459465 62 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 SNORD19B-201ENST00000459623 84 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AC018437.1-201ENST00000492214 406 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 RN7SL323P-201ENST00000494712 295 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 RNU1-95P-201ENST00000516357 160 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 RNU6-1016P-201ENST00000516689 94 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 RNU1-128P-201ENST00000516704 160 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX6-1P78426 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX6-1P78426 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX6-1P78426 HMGN2P15-201ENST00000585707 270 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 AC124303.1-201ENST00000605703 360 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX6-1P78426 AL050343.2-201ENST00000607338 280 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX6-1P78426 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX6-1P78426 AC135507.2-201ENST00000612443 309 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AL161423.1-201ENST00000613700 262 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 PISRT1.1-201ENST00000616930 107 ntBASIC3.45□□□□□ -1.86
NKX6-1P78426 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms