Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
ABCA4P78363 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.84□□□□□ -2.28
ABCA4P78363 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.84□□□□□ -2.28
ABCA4P78363 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA4P78363 RPL30P6-201ENST00000475925 342 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA4P78363 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA4P78363 AC104997.1-201ENST00000519761 717 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.84□□□□□ -2.28
ABCA4P78363 AC022254.1-201ENST00000567857 235 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 AC026271.5-201ENST00000577873 130 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 MIR4713-201ENST00000582691 75 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 MTCYBP22-201ENST00000603788 447 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.84□□□□□ -2.28
ABCA4P78363 AC092140.2-201ENST00000618027 521 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
ABCA4P78363 U2.21-201ENST00000637295 81 ntBASIC0.84□□□□□ -2.28
ABCA4P78363 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.84□□□□□ -2.28
ABCA4P78363 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA4P78363 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA4P78363 RNU11-3P-201ENST00000391111 133 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 NDUFS5P1-201ENST00000405668 289 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.83□□□□□ -2.28
ABCA4P78363 HSPE1P21-201ENST00000438283 308 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 AL357134.1-201ENST00000445848 426 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 HSPE1P24-201ENST00000450782 238 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.83□□□□□ -2.28
ABCA4P78363 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA4P78363 RPS20P20-201ENST00000460498 340 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 AC006512.1-201ENST00000468816 291 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 RPL36AP48-201ENST00000485521 314 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 LARP1BP2-201ENST00000486594 519 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.83□□□□□ -2.28
ABCA4P78363 RNA5SP330-201ENST00000517096 96 ntBASIC0.83□□□□□ -2.28
ABCA4P78363 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.83□□□□□ -2.28
ABCA4P78363 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.83□□□□□ -2.28
ABCA4P78363 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA4P78363 RNU6-486P-201ENST00000363116 107 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 RNU6-140P-201ENST00000384566 108 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 MIR135A2-201ENST00000384854 100 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 OR51A5P-201ENST00000415429 942 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA4P78363 AC007919.1-201ENST00000429380 217 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA4P78363 COX6CP18-201ENST00000448769 222 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.82□□□□□ -2.28
ABCA4P78363 SNORD97-201ENST00000459187 142 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AL049874.1-201ENST00000489560 388 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA4P78363 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA4P78363 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.82□□□□□ -2.28
ABCA4P78363 AL359212.1-201ENST00000556608 614 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AL357094.1-201ENST00000603845 844 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AL109933.3-201ENST00000619095 188 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA4P78363 SNORA62.1-201ENST00000364287 154 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA4P78363 RPL26P27-201ENST00000414397 437 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 RPL21P90-201ENST00000415692 466 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA4P78363 MED14P1-201ENST00000430517 648 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AL096803.2-201ENST00000450032 677 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AL590365.1-201ENST00000450788 243 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.82□□□□□ -2.28
ABCA4P78363 AC105313.1-201ENST00000509121 353 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.82□□□□□ -2.28
ABCA4P78363 RNU6-885P-201ENST00000516607 104 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 RNA5SP137-201ENST00000516833 135 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA4P78363 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.82□□□□□ -2.28
ABCA4P78363 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA4P78363 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
ABCA4P78363 AL161722.3-201ENST00000605789 2983 ntBASIC0.82□□□□□ -2.28
ABCA4P78363 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.81□□□□□ -2.28
ABCA4P78363 RNU6-1078P-201ENST00000364522 103 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 MIR1197-201ENST00000408818 88 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA4P78363 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.81□□□□□ -2.28
ABCA4P78363 MTND3P4-201ENST00000453537 303 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA4P78363 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA4P78363 AP004247.1-201ENST00000531556 1289 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.81□□□□□ -2.28
ABCA4P78363 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.81□□□□□ -2.28
ABCA4P78363 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.81□□□□□ -2.28
ABCA4P78363 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.81□□□□□ -2.28
ABCA4P78363 AL020997.3-201ENST00000602843 359 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC018638.7-201ENST00000605836 1114 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA4P78363 AC079416.3-201ENST00000624479 549 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 HAUS6P2-201ENST00000433254 2404 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
ABCA4P78363 RNU6-115P-201ENST00000364310 107 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AL356131.1-201ENST00000405826 414 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 OR9R1P-201ENST00000412200 877 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AL449283.1-202ENST00000418249 604 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 RPL30P13-201ENST00000418873 348 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AL451054.2-201ENST00000420896 202 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms