Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
YBX1P67809 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
YBX1P67809 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
YBX1P67809 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
YBX1P67809 Y_RNA.33-201ENST00000362591 102 ntBASIC4.04□□□□□ -1.76
YBX1P67809 Y_RNA.200-201ENST00000364018 102 ntBASIC4.04□□□□□ -1.76
YBX1P67809 RNY1-201ENST00000364228 113 ntBASIC4.04□□□□□ -1.76
YBX1P67809 Y_RNA.269-201ENST00000364685 89 ntBASIC4.04□□□□□ -1.76
YBX1P67809 U3.13-201ENST00000364804 214 ntBASIC4.04□□□□□ -1.76
YBX1P67809 RNU6-395P-201ENST00000365662 106 ntBASIC4.04□□□□□ -1.76
YBX1P67809 Y_RNA.439-201ENST00000384119 94 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC091286.1-201ENST00000431233 461 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.04□□□□□ -1.76
YBX1P67809 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.04□□□□□ -1.76
YBX1P67809 AL645939.1-201ENST00000453429 797 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.04□□□□□ -1.76
YBX1P67809 AL592156.1-201ENST00000508758 304 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC022868.1-201ENST00000517767 391 ntBASIC4.04□□□□□ -1.76
YBX1P67809 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.04□□□□□ -1.76
YBX1P67809 AC093023.1-201ENST00000547375 507 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
YBX1P67809 MIR3910-1-201ENST00000580936 111 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC107294.1-201ENST00000609524 467 ntBASIC4.04□□□□□ -1.76
YBX1P67809 MIR376A1-201ENST00000616574 68 ntBASIC4.04□□□□□ -1.76
YBX1P67809 ZYXP1-201ENST00000617638 118 ntBASIC4.04□□□□□ -1.76
YBX1P67809 AC091903.1-201ENST00000624322 454 ntBASIC4.04□□□□□ -1.76
YBX1P67809 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
YBX1P67809 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
YBX1P67809 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
YBX1P67809 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.03□□□□□ -1.76
YBX1P67809 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.03□□□□□ -1.76
YBX1P67809 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
YBX1P67809 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
YBX1P67809 RNU6-187P-201ENST00000384139 106 ntBASIC4.03□□□□□ -1.76
YBX1P67809 SNORD115-46-201ENST00000390982 71 ntBASIC4.03□□□□□ -1.76
YBX1P67809 RNA5SP171-201ENST00000391071 115 ntBASIC4.03□□□□□ -1.76
YBX1P67809 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.03□□□□□ -1.76
YBX1P67809 SNORA11.1-201ENST00000408133 129 ntBASIC4.03□□□□□ -1.76
YBX1P67809 SNORA11.2-201ENST00000408318 127 ntBASIC4.03□□□□□ -1.76
YBX1P67809 RNU6-1025P-201ENST00000410629 104 ntBASIC4.03□□□□□ -1.76
YBX1P67809 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
YBX1P67809 Y_RNA.793-201ENST00000411222 111 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AL513331.1-201ENST00000411908 397 ntBASIC4.03□□□□□ -1.76
YBX1P67809 SNORD56-201ENST00000413522 71 ntBASIC4.03□□□□□ -1.76
YBX1P67809 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
YBX1P67809 MTATP6P4-201ENST00000427725 675 ntBASIC4.03□□□□□ -1.76
YBX1P67809 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.03□□□□□ -1.76
YBX1P67809 AL451050.1-201ENST00000450126 415 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC087588.1-201ENST00000462203 316 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC006517.1-201ENST00000480485 328 ntBASIC4.03□□□□□ -1.76
YBX1P67809 RPL30P10-201ENST00000488148 337 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC010469.2-201ENST00000496412 480 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.03□□□□□ -1.76
YBX1P67809 AC099522.1-202ENST00000514718 367 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.03□□□□□ -1.76
YBX1P67809 MRPL49P2-201ENST00000521066 465 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
YBX1P67809 AL590705.4-201ENST00000532209 134 ntBASIC4.03□□□□□ -1.76
YBX1P67809 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.03□□□□□ -1.76
YBX1P67809 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.03□□□□□ -1.76
YBX1P67809 AP000787.2-201ENST00000604432 568 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC006077.1-201ENST00000604746 343 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AC243829.7-201ENST00000633081 225 ntBASIC4.03□□□□□ -1.76
YBX1P67809 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
YBX1P67809 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
YBX1P67809 AL133412.1-201ENST00000380194 2992 ntBASIC4.02□□□□□ -1.77
YBX1P67809 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
YBX1P67809 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.02□□□□□ -1.77
YBX1P67809 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
YBX1P67809 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
YBX1P67809 RNU6-1266P-201ENST00000362794 105 ntBASIC4.02□□□□□ -1.77
YBX1P67809 Y_RNA.358-201ENST00000365491 99 ntBASIC4.02□□□□□ -1.77
YBX1P67809 SNORD58.1-201ENST00000391313 66 ntBASIC4.02□□□□□ -1.77
YBX1P67809 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.02□□□□□ -1.77
YBX1P67809 MTND3P9-201ENST00000429526 346 ntBASIC4.02□□□□□ -1.77
YBX1P67809 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.02□□□□□ -1.77
YBX1P67809 RNU7-87P-201ENST00000459343 62 ntBASIC4.02□□□□□ -1.77
YBX1P67809 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.02□□□□□ -1.77
YBX1P67809 RNU6-1338P-201ENST00000516328 91 ntBASIC4.02□□□□□ -1.77
YBX1P67809 SCARNA24.2-201ENST00000516968 130 ntBASIC4.02□□□□□ -1.77
YBX1P67809 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.02□□□□□ -1.77
YBX1P67809 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.02□□□□□ -1.77
YBX1P67809 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
YBX1P67809 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.02□□□□□ -1.77
YBX1P67809 AC103996.1-201ENST00000555468 102 ntBASIC4.02□□□□□ -1.77
YBX1P67809 MIR4300-201ENST00000581016 96 ntBASIC4.02□□□□□ -1.77
YBX1P67809 MIR3133-201ENST00000583157 78 ntBASIC4.02□□□□□ -1.77
YBX1P67809 AC002545.1-201ENST00000592511 181 ntBASIC4.02□□□□□ -1.77
YBX1P67809 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.02□□□□□ -1.77
YBX1P67809 AC127459.3-201ENST00000624328 466 ntBASIC4.02□□□□□ -1.77
YBX1P67809 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.02□□□□□ -1.77
YBX1P67809 MFSD8-242ENST00000641690 4199 ntBASIC4.02□□□□□ -1.77
YBX1P67809 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
YBX1P67809 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms