Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 TUG1_2.1-201ENST00000614234 87 ntBASIC0.83□□□□□ -2.28
LSM3P62310 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.83□□□□□ -2.28
LSM3P62310 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.83□□□□□ -2.28
LSM3P62310 MIR1322-201ENST00000638013 71 ntBASIC0.83□□□□□ -2.28
LSM3P62310 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
LSM3P62310 RNU5E-1-201ENST00000362477 120 ntBASIC0.82□□□□□ -2.28
LSM3P62310 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
LSM3P62310 SNORA48.1-201ENST00000390879 135 ntBASIC0.82□□□□□ -2.28
LSM3P62310 RNU2-32P-201ENST00000411193 191 ntBASIC0.82□□□□□ -2.28
LSM3P62310 TPMTP3-201ENST00000411928 735 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.82□□□□□ -2.28
LSM3P62310 MTND4LP7-201ENST00000431728 294 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.82□□□□□ -2.28
LSM3P62310 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.82□□□□□ -2.28
LSM3P62310 AC116655.1-201ENST00000508324 901 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AC117522.2-201ENST00000510049 657 ntBASIC0.82□□□□□ -2.28
LSM3P62310 MTND5P13-201ENST00000513046 1079 ntBASIC0.82□□□□□ -2.28
LSM3P62310 RNU6-714P-201ENST00000516963 103 ntBASIC0.82□□□□□ -2.28
LSM3P62310 RNU6-1183P-201ENST00000517054 60 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AP003122.4-201ENST00000530980 758 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.82□□□□□ -2.28
LSM3P62310 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.82□□□□□ -2.28
LSM3P62310 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.82□□□□□ -2.28
LSM3P62310 AC138915.2-201ENST00000569776 97 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.82□□□□□ -2.28
LSM3P62310 MIR4637-201ENST00000582405 84 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AF038458.1-201ENST00000588406 262 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.82□□□□□ -2.28
LSM3P62310 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
LSM3P62310 CYP2C61P-201ENST00000604072 290 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AL355598.1-201ENST00000604169 202 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AC087045.1-201ENST00000605856 382 ntBASIC0.82□□□□□ -2.28
LSM3P62310 AL132822.1-201ENST00000617063 513 ntBASIC0.82□□□□□ -2.28
LSM3P62310 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.81□□□□□ -2.28
LSM3P62310 OR5T3-201ENST00000303059 1023 ntBASIC0.81□□□□□ -2.28
LSM3P62310 MIR618-201ENST00000385287 98 ntBASIC0.81□□□□□ -2.28
LSM3P62310 COX7BP2-201ENST00000437976 242 ntBASIC0.81□□□□□ -2.28
LSM3P62310 AC092427.1-201ENST00000439177 601 ntBASIC0.81□□□□□ -2.28
LSM3P62310 FABP5P15-201ENST00000453566 214 ntBASIC0.81□□□□□ -2.28
LSM3P62310 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM3P62310 AL441985.1-201ENST00000457727 251 ntBASIC0.81□□□□□ -2.28
LSM3P62310 AC013267.1-201ENST00000458227 267 ntBASIC0.81□□□□□ -2.28
LSM3P62310 RN7SKP210-201ENST00000459176 261 ntBASIC0.81□□□□□ -2.28
LSM3P62310 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.81□□□□□ -2.28
LSM3P62310 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM3P62310 RNU6-927P-201ENST00000516199 100 ntBASIC0.81□□□□□ -2.28
LSM3P62310 CENPUP1-201ENST00000526649 1202 ntBASIC0.81□□□□□ -2.28
LSM3P62310 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM3P62310 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.81□□□□□ -2.28
LSM3P62310 AC091057.3-201ENST00000602684 733 ntBASIC0.81□□□□□ -2.28
LSM3P62310 uc_338.12-201ENST00000616344 181 ntBASIC0.81□□□□□ -2.28
LSM3P62310 MIR8063-201ENST00000621930 81 ntBASIC0.81□□□□□ -2.28
LSM3P62310 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LSM3P62310 RNU6-512P-201ENST00000364438 103 ntBASIC0.8□□□□□ -2.28
LSM3P62310 SNORA25.8-201ENST00000364831 128 ntBASIC0.8□□□□□ -2.28
LSM3P62310 RNU6-1274P-201ENST00000384557 107 ntBASIC0.8□□□□□ -2.28
LSM3P62310 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM3P62310 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LSM3P62310 GPM6BP2-201ENST00000432046 144 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM3P62310 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM3P62310 GPM6BP1-201ENST00000446387 144 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM3P62310 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.8□□□□□ -2.28
LSM3P62310 RPL7P43-201ENST00000478876 753 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM3P62310 AC025465.3-201ENST00000510570 311 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC012414.6-201ENST00000568241 401 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM3P62310 SNORA77B-201ENST00000578179 125 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC021171.1-201ENST00000603137 706 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC107952.2-201ENST00000606048 486 ntBASIC0.8□□□□□ -2.28
LSM3P62310 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LSM3P62310 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.8□□□□□ -2.28
LSM3P62310 AL078604.3-201ENST00000615580 211 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC009269.6-201ENST00000621778 588 ntBASIC0.8□□□□□ -2.28
LSM3P62310 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM3P62310 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.8□□□□□ -2.28
LSM3P62310 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LSM3P62310 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.79□□□□□ -2.28
LSM3P62310 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LSM3P62310 MIR302D-201ENST00000362275 68 ntBASIC0.79□□□□□ -2.28
LSM3P62310 RNU6-1280P-201ENST00000365211 107 ntBASIC0.79□□□□□ -2.28
LSM3P62310 RNU6-26P-201ENST00000383985 107 ntBASIC0.79□□□□□ -2.28
LSM3P62310 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC069282.1-201ENST00000411911 526 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.79□□□□□ -2.28
LSM3P62310 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.79□□□□□ -2.28
LSM3P62310 HMGB1P27-201ENST00000431429 603 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC245517.4-201ENST00000448601 281 ntBASIC0.79□□□□□ -2.28
LSM3P62310 ARPC3P5-201ENST00000448802 534 ntBASIC0.79□□□□□ -2.28
LSM3P62310 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.79□□□□□ -2.28
LSM3P62310 snoU13.8-201ENST00000458890 104 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.79□□□□□ -2.28
LSM3P62310 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.79□□□□□ -2.28
LSM3P62310 RNU6-390P-201ENST00000516259 103 ntBASIC0.79□□□□□ -2.28
LSM3P62310 RNU6-965P-201ENST00000516721 96 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC019176.1-201ENST00000518519 225 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms