Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC093536.2-201ENST00000565257 1406 ntBASIC2.2□□□□□ -2.06
LIM2P55344 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LIM2P55344 RNU6-461P-201ENST00000364195 107 ntBASIC2.2□□□□□ -2.06
LIM2P55344 RNY4P34-201ENST00000364779 95 ntBASIC2.2□□□□□ -2.06
LIM2P55344 RNU6-297P-201ENST00000384636 107 ntBASIC2.2□□□□□ -2.06
LIM2P55344 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LIM2P55344 BX682237.1-201ENST00000415016 335 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.2□□□□□ -2.06
LIM2P55344 AC093106.2-201ENST00000428212 385 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.2□□□□□ -2.06
LIM2P55344 AL161651.1-201ENST00000440882 223 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AL078601.1-201ENST00000444542 271 ntBASIC2.2□□□□□ -2.06
LIM2P55344 NDUFB1P2-201ENST00000449477 176 ntBASIC2.2□□□□□ -2.06
LIM2P55344 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.2□□□□□ -2.06
LIM2P55344 SNORA59A-201ENST00000459326 152 ntBASIC2.2□□□□□ -2.06
LIM2P55344 RPL23AP70-201ENST00000483361 460 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AC108078.2-201ENST00000510750 236 ntBASIC2.2□□□□□ -2.06
LIM2P55344 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.2□□□□□ -2.06
LIM2P55344 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.2□□□□□ -2.06
LIM2P55344 Y_RNA.689-201ENST00000516589 107 ntBASIC2.2□□□□□ -2.06
LIM2P55344 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.2□□□□□ -2.06
LIM2P55344 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.2□□□□□ -2.06
LIM2P55344 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.2□□□□□ -2.06
LIM2P55344 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.2□□□□□ -2.06
LIM2P55344 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
LIM2P55344 CLIC4P2-201ENST00000601934 717 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AC091152.3-201ENST00000604227 325 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AL161734.1-201ENST00000609720 557 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AC073114.1-201ENST00000612027 490 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AL158063.1-201ENST00000615349 536 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
LIM2P55344 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.2□□□□□ -2.06
LIM2P55344 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.2□□□□□ -2.06
LIM2P55344 MIR7157-201ENST00000635801 60 ntBASIC2.2□□□□□ -2.06
LIM2P55344 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LIM2P55344 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LIM2P55344 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LIM2P55344 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 AC004944.1-201ENST00000517807 3059 ntBASIC2.19□□□□□ -2.06
LIM2P55344 Y_RNA.77-201ENST00000362962 107 ntBASIC2.19□□□□□ -2.06
LIM2P55344 XGY1-201ENST00000381172 446 ntBASIC2.19□□□□□ -2.06
LIM2P55344 RNU1-109P-201ENST00000383960 147 ntBASIC2.19□□□□□ -2.06
LIM2P55344 RNU6-641P-201ENST00000384006 107 ntBASIC2.19□□□□□ -2.06
LIM2P55344 RNU6-748P-201ENST00000384648 107 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AL356057.2-201ENST00000403318 432 ntBASIC2.19□□□□□ -2.06
LIM2P55344 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
LIM2P55344 RNU6-1025P-201ENST00000410629 104 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.19□□□□□ -2.06
LIM2P55344 MTCYBP5-201ENST00000423752 1135 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.19□□□□□ -2.06
LIM2P55344 GPR143P-201ENST00000434155 205 ntBASIC2.19□□□□□ -2.06
LIM2P55344 RPS15AP28-201ENST00000435088 386 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.19□□□□□ -2.06
LIM2P55344 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.19□□□□□ -2.06
LIM2P55344 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.19□□□□□ -2.06
LIM2P55344 AL022238.1-201ENST00000442557 355 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.19□□□□□ -2.06
LIM2P55344 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.19□□□□□ -2.06
LIM2P55344 SCARNA24.1-201ENST00000516465 137 ntBASIC2.19□□□□□ -2.06
LIM2P55344 Y_RNA.688-201ENST00000516565 95 ntBASIC2.19□□□□□ -2.06
LIM2P55344 RNU6-572P-201ENST00000516724 80 ntBASIC2.19□□□□□ -2.06
LIM2P55344 SNORA31.19-201ENST00000517079 126 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC025755.1-201ENST00000521306 278 ntBASIC2.19□□□□□ -2.06
LIM2P55344 COX6CP5-201ENST00000527162 228 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC087241.2-201ENST00000535801 324 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.19□□□□□ -2.06
LIM2P55344 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.19□□□□□ -2.06
LIM2P55344 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.19□□□□□ -2.06
LIM2P55344 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.19□□□□□ -2.06
LIM2P55344 LINC00933-203ENST00000559812 219 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC105137.2-201ENST00000569073 466 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC137800.2-201ENST00000574375 120 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC090616.3-201ENST00000582184 217 ntBASIC2.19□□□□□ -2.06
LIM2P55344 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 SEPT7P9-203ENST00000604116 343 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AC064872.1-201ENST00000604823 1072 ntBASIC2.19□□□□□ -2.06
LIM2P55344 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
LIM2P55344 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.19□□□□□ -2.06
LIM2P55344 U6.99-201ENST00000637524 83 ntBASIC2.19□□□□□ -2.06
LIM2P55344 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.19□□□□□ -2.06
LIM2P55344 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIM2P55344 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
LIM2P55344 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LIM2P55344 MIR412-201ENST00000362142 91 ntBASIC2.18□□□□□ -2.06
LIM2P55344 RNU6-179P-201ENST00000363350 107 ntBASIC2.18□□□□□ -2.06
LIM2P55344 SNORA4.3-201ENST00000365564 137 ntBASIC2.18□□□□□ -2.06
LIM2P55344 SNORA24.1-201ENST00000384401 135 ntBASIC2.18□□□□□ -2.06
LIM2P55344 RPS4XP7-201ENST00000406274 780 ntBASIC2.18□□□□□ -2.06
LIM2P55344 RN7SKP142-201ENST00000411236 328 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC092809.3-201ENST00000415453 231 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.18□□□□□ -2.06
LIM2P55344 AC009518.2-201ENST00000418056 731 ntBASIC2.18□□□□□ -2.06
LIM2P55344 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.18□□□□□ -2.06
LIM2P55344 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.18□□□□□ -2.06
LIM2P55344 PIGFP2-201ENST00000421400 651 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms