Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RNA5SP503-201ENST00000517047 117 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.86□□□□□ -1.79
ATXN1P54253 AC023157.2-201ENST00000540596 141 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.86□□□□□ -1.79
ATXN1P54253 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.86□□□□□ -1.79
ATXN1P54253 NCAPGP2-201ENST00000557911 754 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 MIR4775-201ENST00000581168 75 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 AF038458.1-201ENST00000588406 262 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.86□□□□□ -1.79
ATXN1P54253 AC083806.3-201ENST00000614016 455 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 AL450472.3-201ENST00000615578 367 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATXN1P54253 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.86□□□□□ -1.79
ATXN1P54253 U6.114-201ENST00000636407 96 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATXN1P54253 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
ATXN1P54253 AC010733.2-201ENST00000589496 5702 ntBASIC3.86□□□□□ -1.79
ATXN1P54253 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATXN1P54253 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
ATXN1P54253 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATXN1P54253 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATXN1P54253 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ATXN1P54253 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATXN1P54253 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
ATXN1P54253 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ATXN1P54253 AC004972.1-201ENST00000623934 2209 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
ATXN1P54253 SNORD50.1-201ENST00000362987 71 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 RNA5SP50-201ENST00000363731 107 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 Y_RNA.180-201ENST00000363867 113 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 Y_RNA.339-201ENST00000365325 102 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 Y_RNA.477-201ENST00000384352 108 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 Y_RNA.555-201ENST00000384673 110 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 Y_RNA.645-201ENST00000391229 102 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.85□□□□□ -1.79
ATXN1P54253 RPL37P10-201ENST00000412884 288 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.85□□□□□ -1.79
ATXN1P54253 RPL21P109-201ENST00000422213 475 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 RPL27AP8-201ENST00000424277 446 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC017083.1-201ENST00000428093 483 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 RPL36AP6-201ENST00000435770 321 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC114801.2-201ENST00000503825 781 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.85□□□□□ -1.79
ATXN1P54253 RNU4-29P-201ENST00000515943 174 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 RNA5SP164-201ENST00000516533 110 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 RN7SKP219-201ENST00000516825 296 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 NARSP2-201ENST00000518524 679 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.85□□□□□ -1.79
ATXN1P54253 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATXN1P54253 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.85□□□□□ -1.79
ATXN1P54253 AC007458.1-201ENST00000542812 373 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC022080.3-201ENST00000544433 482 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 MIR548AI-201ENST00000579940 88 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC113195.1-201ENST00000579952 141 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 MIR5187-201ENST00000583479 76 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.85□□□□□ -1.79
ATXN1P54253 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.85□□□□□ -1.79
ATXN1P54253 AC104695.3-201ENST00000604052 296 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 PLCE1P1-201ENST00000622094 305 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 NCAPGP1-201ENST00000505112 1814 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATXN1P54253 AL353746.1-201ENST00000566293 6881 ntBASIC3.85□□□□□ -1.79
ATXN1P54253 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ATXN1P54253 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATXN1P54253 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATXN1P54253 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATXN1P54253 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
ATXN1P54253 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATXN1P54253 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATXN1P54253 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.84□□□□□ -1.79
ATXN1P54253 DEFB108F-201ENST00000344638 222 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 RNU6-960P-201ENST00000364056 120 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 SNORA38.1-201ENST00000364172 131 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 SNORD50B-201ENST00000364995 70 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 RNU6-1029P-201ENST00000384109 107 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 RNU1-89P-201ENST00000384592 164 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATXN1P54253 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATXN1P54253 RNU6-370P-201ENST00000411008 104 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 RN7SKP53-201ENST00000411337 315 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.84□□□□□ -1.79
ATXN1P54253 AL451074.5-201ENST00000415894 435 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 DPH3P2-201ENST00000422618 250 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 UBE2D3P2-201ENST00000424409 445 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.84□□□□□ -1.79
ATXN1P54253 MTATP6P4-201ENST00000427725 675 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AC093106.2-201ENST00000428212 385 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.84□□□□□ -1.79
ATXN1P54253 AL035666.1-201ENST00000446195 348 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.84□□□□□ -1.79
ATXN1P54253 AL590664.1-201ENST00000448065 339 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.84□□□□□ -1.79
ATXN1P54253 RN7SL432P-201ENST00000484057 298 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AC091885.1-201ENST00000506658 268 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.84□□□□□ -1.79
ATXN1P54253 AC025465.3-201ENST00000510570 311 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 RNU6-408P-201ENST00000515910 100 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 Y_RNA.661-201ENST00000516003 99 ntBASIC3.84□□□□□ -1.79
ATXN1P54253 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms