Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CDK8P2-201ENST00000415020 547 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
LIMK1P53667 BPY2DP-201ENST00000422208 265 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.82□□□□□ -1.96
LIMK1P53667 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 MTATP6P16-201ENST00000434543 526 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AL031667.1-201ENST00000440222 725 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.82□□□□□ -1.96
LIMK1P53667 GSTA11P-201ENST00000452866 669 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC023194.1-201ENST00000493084 308 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 EIF4EP3-201ENST00000498782 656 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC109927.2-201ENST00000506416 303 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC079140.3-201ENST00000511111 550 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.82□□□□□ -1.96
LIMK1P53667 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIMK1P53667 MTCO3P28-201ENST00000513351 515 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.82□□□□□ -1.96
LIMK1P53667 AC022447.1-201ENST00000515358 464 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 Y_RNA.676-201ENST00000516393 96 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 RNU6-445P-201ENST00000516949 107 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 RNU6-1315P-201ENST00000517187 99 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC025755.1-201ENST00000521306 278 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 MTCYBP20-201ENST00000524239 1129 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.82□□□□□ -1.96
LIMK1P53667 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.82□□□□□ -1.96
LIMK1P53667 RANP3-201ENST00000530970 276 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 OR5AL2P-201ENST00000532185 920 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LIMK1P53667 AC009163.5-201ENST00000575421 637 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 MIR4782-201ENST00000577987 79 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LIMK1P53667 AC012409.4-201ENST00000612923 249 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 MIR6817-201ENST00000615588 66 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AC009090.3-201ENST00000616553 565 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
LIMK1P53667 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
LIMK1P53667 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LIMK1P53667 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
LIMK1P53667 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIMK1P53667 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIMK1P53667 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AL591704.1-201ENST00000432574 275 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMK1P53667 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMK1P53667 MTATP6P7-201ENST00000453315 681 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 MTCYBP1-201ENST00000454315 1119 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC233279.1-201ENST00000455300 423 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 RPS3AP17-201ENST00000472594 777 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMK1P53667 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.81□□□□□ -1.96
LIMK1P53667 RBBP4P6-201ENST00000508098 202 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 RNU6-572P-201ENST00000516724 80 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LIMK1P53667 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.81□□□□□ -1.96
LIMK1P53667 AP003392.2-201ENST00000527269 208 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMK1P53667 OR4R1P-201ENST00000529879 463 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.81□□□□□ -1.96
LIMK1P53667 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.81□□□□□ -1.96
LIMK1P53667 DEFB122-202ENST00000569013 197 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 MIR1273C-201ENST00000578669 77 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 MIR5194-201ENST00000582634 120 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.81□□□□□ -1.96
LIMK1P53667 AC126118.1-201ENST00000607744 628 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AC048344.4-201ENST00000619744 527 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMK1P53667 AC092608.2-201ENST00000624427 218 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 AL157786.1-207ENST00000627771 695 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 U2.21-201ENST00000637295 81 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LIMK1P53667 AC110491.1-201ENST00000562191 2010 ntBASIC2.81□□□□□ -1.96
LIMK1P53667 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIMK1P53667 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIMK1P53667 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIMK1P53667 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LIMK1P53667 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIMK1P53667 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
LIMK1P53667 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.8□□□□□ -1.96
LIMK1P53667 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LIMK1P53667 AC010329.5-201ENST00000623497 2174 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LIMK1P53667 Y_RNA.33-201ENST00000362591 102 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 RNU6-282P-201ENST00000365357 103 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 Y_RNA.534-201ENST00000384599 112 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 DEFB108C-201ENST00000400154 252 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 AC023141.4-201ENST00000412031 328 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 BTF3L4P1-201ENST00000413813 468 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.8□□□□□ -1.96
LIMK1P53667 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMK1P53667 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.8□□□□□ -1.96
LIMK1P53667 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.8□□□□□ -1.96
LIMK1P53667 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMK1P53667 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMK1P53667 NIPA2P5-201ENST00000452282 464 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMK1P53667 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 C1DP4-201ENST00000455429 424 ntBASIC2.8□□□□□ -1.96
LIMK1P53667 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMK1P53667 AC022364.2-201ENST00000457963 554 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms