Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNA5SP240-201ENST00000365355 128 ntBASIC1.83□□□□□ -2.12
RFC3P40938 RNU6-157P-201ENST00000383957 107 ntBASIC1.83□□□□□ -2.12
RFC3P40938 RNU6-906P-201ENST00000384700 70 ntBASIC1.83□□□□□ -2.12
RFC3P40938 MIR518D-201ENST00000385014 87 ntBASIC1.83□□□□□ -2.12
RFC3P40938 MIR301A-201ENST00000385261 86 ntBASIC1.83□□□□□ -2.12
RFC3P40938 ELOCP17-201ENST00000414751 326 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC3P40938 AL353706.1-201ENST00000436728 494 ntBASIC1.83□□□□□ -2.12
RFC3P40938 USP9YP8-201ENST00000441913 500 ntBASIC1.83□□□□□ -2.12
RFC3P40938 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC3P40938 CYP2C59P-201ENST00000457790 269 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AC025033.1-201ENST00000463883 194 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC3P40938 AC011005.2-201ENST00000487324 359 ntBASIC1.83□□□□□ -2.12
RFC3P40938 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC3P40938 DEFB122-202ENST00000569013 197 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 RNU6-91P-201ENST00000607774 107 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AL365204.3-201ENST00000612448 685 ntBASIC1.83□□□□□ -2.12
RFC3P40938 Z99571.1-201ENST00000636677 394 ntBASIC1.83□□□□□ -2.12
RFC3P40938 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 MTND5P42-201ENST00000637720 498 ntBASIC1.83□□□□□ -2.12
RFC3P40938 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RFC3P40938 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
RFC3P40938 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.82□□□□□ -2.12
RFC3P40938 Y_RNA.534-201ENST00000384599 112 ntBASIC1.82□□□□□ -2.12
RFC3P40938 MIR95-201ENST00000385072 81 ntBASIC1.82□□□□□ -2.12
RFC3P40938 RNU2-62P-201ENST00000410868 191 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 EDDM3CP-201ENST00000415977 425 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 MTCO2P21-201ENST00000419780 677 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL591704.1-201ENST00000432574 275 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL021397.1-201ENST00000451806 248 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL049829.1-201ENST00000465411 156 ntBASIC1.82□□□□□ -2.12
RFC3P40938 MTND1P3-201ENST00000484956 952 ntBASIC1.82□□□□□ -2.12
RFC3P40938 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
RFC3P40938 RPL23AP63-201ENST00000498752 471 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC104685.1-201ENST00000502445 371 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 SNORA25.11-201ENST00000515935 105 ntBASIC1.82□□□□□ -2.12
RFC3P40938 RNU2-44P-201ENST00000516795 194 ntBASIC1.82□□□□□ -2.12
RFC3P40938 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 MTATP6P15-201ENST00000527233 835 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.82□□□□□ -2.12
RFC3P40938 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 MIR3146-201ENST00000580367 79 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC3P40938 MIR4307-201ENST00000582802 84 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC009977.1-201ENST00000586015 570 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AC112187.2-201ENST00000604345 283 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
RFC3P40938 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.82□□□□□ -2.12
RFC3P40938 AL512643.1-201ENST00000635735 524 ntBASIC1.82□□□□□ -2.12
RFC3P40938 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.81□□□□□ -2.12
RFC3P40938 Y_RNA.46-201ENST00000362695 102 ntBASIC1.81□□□□□ -2.12
RFC3P40938 RNU6-898P-201ENST00000365627 104 ntBASIC1.81□□□□□ -2.12
RFC3P40938 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
RFC3P40938 CIR1P3-201ENST00000405137 479 ntBASIC1.81□□□□□ -2.12
RFC3P40938 RNU2-20P-201ENST00000410425 191 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.81□□□□□ -2.12
RFC3P40938 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC009238.1-201ENST00000442165 424 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC009237.6-201ENST00000446969 424 ntBASIC1.81□□□□□ -2.12
RFC3P40938 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.81□□□□□ -2.12
RFC3P40938 BTF3P15-201ENST00000455606 336 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.81□□□□□ -2.12
RFC3P40938 AC112771.1-201ENST00000463581 102 ntBASIC1.81□□□□□ -2.12
RFC3P40938 RPL23AP42-201ENST00000471152 471 ntBASIC1.81□□□□□ -2.12
RFC3P40938 RNU5B-3P-201ENST00000516601 115 ntBASIC1.81□□□□□ -2.12
RFC3P40938 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
RFC3P40938 SNORA31.19-201ENST00000517079 126 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.81□□□□□ -2.12
RFC3P40938 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.81□□□□□ -2.12
RFC3P40938 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RFC3P40938 AC023050.2-201ENST00000544968 387 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.81□□□□□ -2.12
RFC3P40938 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RFC3P40938 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.81□□□□□ -2.12
RFC3P40938 MIR5002-201ENST00000584713 97 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC011494.1-201ENST00000596454 237 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.81□□□□□ -2.12
RFC3P40938 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.81□□□□□ -2.12
RFC3P40938 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RFC3P40938 uc_338.12-201ENST00000616344 181 ntBASIC1.81□□□□□ -2.12
RFC3P40938 YWHAEP7-203ENST00000622054 312 ntBASIC1.81□□□□□ -2.12
RFC3P40938 FRG1KP-201ENST00000623592 341 ntBASIC1.81□□□□□ -2.12
RFC3P40938 AC103706.2-201ENST00000638080 240 ntBASIC1.81□□□□□ -2.12
RFC3P40938 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms