Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNA5SP494-201ENST00000410653 129 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 RPS29P17-201ENST00000430795 166 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 AC124916.1-201ENST00000444020 547 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 AL132838.2-201ENST00000492041 314 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 RPL23AP49-201ENST00000492925 468 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 SNORA43.2-201ENST00000516652 128 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 SNORA31.18-201ENST00000517043 134 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 MRPL49P2-201ENST00000521066 465 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXC12P31275 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC12P31275 AC025884.1-201ENST00000556034 378 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXC12P31275 ARF4P1-201ENST00000605447 541 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 AC020634.1-201ENST00000608701 549 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 AL110115.1-201ENST00000614396 364 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 RNA5SP196-201ENST00000625967 102 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HOXC12P31275 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC12P31275 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HOXC12P31275 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC12P31275 AC032011.1-201ENST00000611703 1549 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HOXC12P31275 AC090740.1-201ENST00000623193 2262 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 MIR448-201ENST00000362131 111 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 SNORA69.1-201ENST00000390904 137 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 BTF3L4P2-201ENST00000392798 346 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 Y_RNA.618-201ENST00000410949 107 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 RPS20P14-201ENST00000412545 360 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 RPL26P27-201ENST00000414397 437 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AL159169.1-201ENST00000421119 127 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC12P31275 AL132765.1-201ENST00000434165 553 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 RPL21P2-201ENST00000440049 481 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC098831.1-201ENST00000440661 216 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 RPL37P4-201ENST00000448908 268 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC012671.1-201ENST00000451912 203 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC006026.2-201ENST00000457376 180 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC12P31275 RPL21P126-201ENST00000470049 478 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC084357.1-201ENST00000473404 255 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 RN7SL810P-201ENST00000493031 276 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC009812.2-201ENST00000517657 457 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AP004607.1-201ENST00000524456 203 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AL590705.4-201ENST00000532209 134 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC12P31275 AC015912.2-201ENST00000571053 181 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC12P31275 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 AC020895.1-201ENST00000595362 272 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 AC100812.1-201ENST00000607622 580 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 U2.1-201ENST00000618978 145 ntBASIC3.95□□□□□ -1.78
HOXC12P31275 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC12P31275 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC12P31275 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC12P31275 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXC12P31275 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
HOXC12P31275 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC12P31275 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC12P31275 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC12P31275 RNU6-105P-201ENST00000363909 104 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 SAR1AP2-201ENST00000392696 594 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC12P31275 MIR921-201ENST00000401133 56 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 Z74021.1-201ENST00000423610 407 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC12P31275 AC007389.2-201ENST00000434630 306 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 DYNLT3P2-201ENST00000442517 295 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 OSTCP8-201ENST00000445117 448 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC079354.2-201ENST00000453523 154 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXC12P31275 AC093852.1-201ENST00000503587 266 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC010265.1-201ENST00000513509 211 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 RNU6-928P-201ENST00000516876 104 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC12P31275 AP000827.1-201ENST00000527814 258 ntBASIC3.94□□□□□ -1.78
HOXC12P31275 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC12P31275 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC12P31275 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC12P31275 IPO5P1-202ENST00000600039 287 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms