Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AP001372.4-201ENST00000524889 472 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 MIR3146-201ENST00000580367 79 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 MIR3118-1-201ENST00000581787 76 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 NRBF2P1-201ENST00000587407 859 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC026790.2-201ENST00000606282 430 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC103710.2-201ENST00000609912 942 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC103710.1-201ENST00000610003 901 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AL050303.3-201ENST00000613704 284 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC022960.3-201ENST00000619794 441 ntBASIC1.65□□□□□ -2.15
HLA-DMAP28067 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.65□□□□□ -2.15
HLA-DMAP28067 AL136360.1-201ENST00000503377 1900 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 SNORA4.3-201ENST00000365564 137 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 RNU6-748P-201ENST00000384648 107 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 MIR95-201ENST00000385072 81 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL021407.1-201ENST00000404531 386 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 RNU2-20P-201ENST00000410425 191 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 MTND4P25-201ENST00000441039 533 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 NEFMP1-201ENST00000443423 1006 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 RPL7P12-201ENST00000446719 750 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 BZW1P2-201ENST00000473537 826 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC004924.1-201ENST00000480160 781 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 MTAPP1-201ENST00000489154 819 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 HMGB1P35-201ENST00000503360 598 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC034244.1-201ENST00000507687 207 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 SNORA25.11-201ENST00000515935 105 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 RNU6-1183P-201ENST00000517054 60 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC009902.1-201ENST00000519351 183 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC068587.4-201ENST00000533893 186 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL121821.2-201ENST00000556081 394 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC090888.2-201ENST00000559765 1144 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC009097.3-201ENST00000563557 1018 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 DEFB122-202ENST00000569013 197 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL354943.1-201ENST00000572103 781 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 ROCK1P1-201ENST00000573767 549 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DMAP28067 KC877982.1-201ENST00000602313 470 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AP001981.2-201ENST00000603241 418 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 AL356266.1-201ENST00000623311 483 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 AC007671.2-201ENST00000637344 619 ntBASIC1.64□□□□□ -2.15
HLA-DMAP28067 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DMAP28067 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DMAP28067 Z75746.1-201ENST00000440243 2080 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 RNU6-1214P-201ENST00000363650 109 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 RNU6-809P-201ENST00000384461 107 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AL033519.2-201ENST00000403958 392 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 MIR1302-8-201ENST00000408342 128 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 RPS12P24-201ENST00000412619 387 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC092809.3-201ENST00000415453 231 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC097463.2-201ENST00000421074 142 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC011233.1-201ENST00000422812 283 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 RPL7P34-201ENST00000433316 712 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AL161788.1-201ENST00000441805 169 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 MTND6P13-201ENST00000443510 523 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC087884.1-201ENST00000469738 328 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 RNU6-1003P-201ENST00000517099 105 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 MTATP6P15-201ENST00000527233 835 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DMAP28067 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC010928.2-201ENST00000588017 287 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AL078605.1-201ENST00000603529 500 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC104763.2-201ENST00000604179 382 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC144521.1-201ENST00000607148 956 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC090970.3-201ENST00000612566 866 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC130324.3-201ENST00000614165 542 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 AC104010.1-201ENST00000616889 150 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms