Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC3P19447 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.7□□□□□ -1.66
ERCC3P19447 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC3P19447 RNA5SP295-201ENST00000362655 121 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 Y_RNA.48-201ENST00000362710 103 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 Y_RNA.202-201ENST00000364083 110 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 RNU6-842P-201ENST00000384269 107 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 MIR200C-201ENST00000384980 68 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 snosnR66.1-201ENST00000391095 99 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AL117339.3-201ENST00000418733 162 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 RBMY1KP-201ENST00000423480 476 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 TBCAP1-201ENST00000436520 327 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC098831.1-201ENST00000440661 216 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 NOTCH2P1-201ENST00000443481 624 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC124916.1-201ENST00000444020 547 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC125238.1-201ENST00000448842 249 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 ABCF2P2-201ENST00000450549 296 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC3P19447 U3.44-201ENST00000458938 192 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 HMGN2P13-201ENST00000476476 274 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.7□□□□□ -1.66
ERCC3P19447 RNU6-581P-201ENST00000516214 105 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 MIR2114-201ENST00000516645 80 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AL391261.3-201ENST00000557194 520 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC3P19447 AC005899.2-201ENST00000584353 90 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 HMGN2P15-201ENST00000585707 270 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 BNIP3P16-201ENST00000589779 534 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC097372.5-201ENST00000623665 376 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 AC090617.7-201ENST00000623952 126 ntBASIC4.7□□□□□ -1.66
ERCC3P19447 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ERCC3P19447 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC3P19447 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC3P19447 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC3P19447 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC3P19447 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC3P19447 AC018555.1-201ENST00000567548 1980 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ERCC3P19447 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC3P19447 RNA5SP124-201ENST00000362739 110 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 RNU6-213P-201ENST00000384051 104 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 SNORA75.6-201ENST00000391318 127 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 MTHFD2P2-201ENST00000407725 247 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.69□□□□□ -1.66
ERCC3P19447 AC005300.1-201ENST00000428401 373 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 FO393415.2-201ENST00000480085 343 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 AL163540.1-201ENST00000485382 386 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 RPL32P34-201ENST00000486380 400 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 AC096576.1-201ENST00000489014 359 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 AC022493.2-201ENST00000506122 481 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 SMURF2P1-201ENST00000514992 481 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 RNU6-120P-201ENST00000516077 103 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC3P19447 MIR5684-201ENST00000585074 65 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 AC016925.2-201ENST00000605108 242 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 MIR6868-201ENST00000611215 58 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 PART1_1.1-201ENST00000611761 217 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 MIR8058-201ENST00000615737 89 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ERCC3P19447 AC138627.2-201ENST00000624202 601 ntBASIC4.69□□□□□ -1.66
ERCC3P19447 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC3P19447 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ERCC3P19447 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC3P19447 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ERCC3P19447 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC3P19447 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC3P19447 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ERCC3P19447 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC3P19447 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC3P19447 Y_RNA.31-201ENST00000362574 102 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 SNORA70.4-201ENST00000365509 134 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ERCC3P19447 RNA5SP38-201ENST00000410750 119 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 AC096664.2-201ENST00000411843 406 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 RAB9AP3-201ENST00000412737 573 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 AL591043.1-201ENST00000432461 424 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC3P19447 RAB9AP1-201ENST00000449393 573 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 RPL7P47-201ENST00000497299 556 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 PTP4A1P4-201ENST00000512479 322 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC3P19447 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC3P19447 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC3P19447 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC3P19447 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC3P19447 AC022432.1-201ENST00000595739 310 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 SNRPGP17-201ENST00000603780 214 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 AL121772.2-201ENST00000614331 297 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 uc_338.22-201ENST00000622722 187 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 MIR3199-2-201ENST00000636243 86 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 U4.7-201ENST00000638126 106 ntBASIC4.68□□□□□ -1.66
ERCC3P19447 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.68□□□□□ -1.66
ERCC3P19447 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ERCC3P19447 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERCC3P19447 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.67□□□□□ -1.66
ERCC3P19447 LINC02471-203ENST00000641941 4752 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.67□□□□□ -1.66
ERCC3P19447 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms