Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNORA3.2-201ENST00000408221 125 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.28□□□□□ -2.04
XRCC1P18887 Z98742.3-201ENST00000418637 326 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC093106.2-201ENST00000428212 385 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 MED13P1-201ENST00000428342 171 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.28□□□□□ -2.04
XRCC1P18887 AL356320.1-201ENST00000429616 163 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 WARS2P1-201ENST00000429678 537 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.28□□□□□ -2.04
XRCC1P18887 RPL23AP30-201ENST00000432419 501 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AL445687.1-201ENST00000439946 251 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 MTND6P13-201ENST00000443510 523 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AL136380.1-201ENST00000447970 162 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.28□□□□□ -2.04
XRCC1P18887 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.28□□□□□ -2.04
XRCC1P18887 GZMAP1-201ENST00000503054 631 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 RNA5SP281-201ENST00000516504 135 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 IGLV3-17-201ENST00000519099 244 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC009902.1-201ENST00000519351 183 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.28□□□□□ -2.04
XRCC1P18887 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.28□□□□□ -2.04
XRCC1P18887 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.28□□□□□ -2.04
XRCC1P18887 LINC00933-203ENST00000559812 219 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.28□□□□□ -2.04
XRCC1P18887 AC090616.3-201ENST00000582184 217 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC091152.3-201ENST00000604227 325 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 uc_338.14-201ENST00000613162 166 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC130324.3-201ENST00000614165 542 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 MIR6134-201ENST00000617606 109 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AL449363.1-201ENST00000617815 186 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 AC091931.1-201ENST00000623488 728 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
XRCC1P18887 AC006020.1-201ENST00000420179 1854 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
XRCC1P18887 MTND5P30-201ENST00000452896 1731 ntBASIC2.28□□□□□ -2.05
XRCC1P18887 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
XRCC1P18887 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
XRCC1P18887 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.27□□□□□ -2.05
XRCC1P18887 Y_RNA.33-201ENST00000362591 102 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RNU4-21P-201ENST00000362802 126 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 Y_RNA.169-201ENST00000363745 96 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 SNORA4.3-201ENST00000365564 137 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RNU6-395P-201ENST00000365662 106 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RNU6-19P-201ENST00000384718 107 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 MIR558-201ENST00000384920 94 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 MT-TH-201ENST00000387441 69 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RPS3AP3-201ENST00000411933 242 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.27□□□□□ -2.05
XRCC1P18887 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.27□□□□□ -2.05
XRCC1P18887 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.27□□□□□ -2.05
XRCC1P18887 AL441985.1-201ENST00000457727 251 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RNA5SP269-201ENST00000459032 137 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.27□□□□□ -2.05
XRCC1P18887 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.27□□□□□ -2.05
XRCC1P18887 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.27□□□□□ -2.05
XRCC1P18887 RNU1-41P-201ENST00000516161 162 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 RNU1-48P-201ENST00000516400 162 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 Y_RNA.689-201ENST00000516589 107 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC025755.1-201ENST00000521306 278 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AL121821.2-201ENST00000556081 394 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AL157871.3-201ENST00000557231 293 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 MIR3167-201ENST00000579623 85 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.27□□□□□ -2.05
XRCC1P18887 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.27□□□□□ -2.05
XRCC1P18887 AC005261.5-201ENST00000596280 355 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC073544.2-201ENST00000601155 540 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AL356280.1-201ENST00000603614 379 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC068276.1-201ENST00000605793 379 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 MIR15A-201ENST00000607334 83 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AC120349.3-201ENST00000624377 529 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 AL603839.4-201ENST00000624658 1005 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 MIR7157-201ENST00000635801 60 ntBASIC2.27□□□□□ -2.05
XRCC1P18887 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.27□□□□□ -2.05
XRCC1P18887 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
XRCC1P18887 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
XRCC1P18887 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
XRCC1P18887 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
XRCC1P18887 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
XRCC1P18887 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
XRCC1P18887 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
XRCC1P18887 OR5H15-201ENST00000383696 930 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 SNORA70B-201ENST00000384210 135 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 RNU2-39P-201ENST00000410604 198 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.26□□□□□ -2.05
XRCC1P18887 MTND2P18-201ENST00000419962 1030 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
XRCC1P18887 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.26□□□□□ -2.05
XRCC1P18887 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.26□□□□□ -2.05
XRCC1P18887 AC098826.2-201ENST00000452011 651 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AL033528.1-201ENST00000453780 140 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.26□□□□□ -2.05
XRCC1P18887 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.26□□□□□ -2.05
XRCC1P18887 AC117522.1-201ENST00000509821 380 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 RNU6-572P-201ENST00000516724 80 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 RNU2-46P-201ENST00000517038 113 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms