Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGA1P17096 MTND4P8-201ENST00000514997 1362 ntBASIC0.39□□□□□ -2.35
HMGA1P17096 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HMGA1P17096 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.38□□□□□ -2.35
HMGA1P17096 RNA5SP240-201ENST00000365355 128 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGA1P17096 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGA1P17096 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGA1P17096 RPS20P10-201ENST00000451209 253 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 RPL26P9-201ENST00000457466 433 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 AC114982.1-201ENST00000469402 321 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 BET1P1-201ENST00000482276 359 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 AC136628.3-201ENST00000521868 290 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGA1P17096 AL078604.3-201ENST00000615580 211 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 MIR8063-201ENST00000621930 81 ntBASIC0.38□□□□□ -2.35
HMGA1P17096 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HMGA1P17096 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 RNU1-124P-201ENST00000363861 145 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 MIR597-201ENST00000384968 97 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 RNU2-70P-201ENST00000410718 179 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 AC097463.2-201ENST00000421074 142 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGA1P17096 PRELID3BP1-201ENST00000457142 540 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.37□□□□□ -2.35
HMGA1P17096 AC008494.2-201ENST00000514544 370 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.37□□□□□ -2.35
HMGA1P17096 AC104229.1-201ENST00000561364 255 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 AC105036.1-201ENST00000566222 271 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 AL031775.1-201ENST00000607014 887 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 AL365204.3-201ENST00000612448 685 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 uc_338.17-201ENST00000619633 179 ntBASIC0.37□□□□□ -2.35
HMGA1P17096 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HMGA1P17096 RNU6-968P-201ENST00000384076 107 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 NDUFB4P7-201ENST00000423198 363 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 AL590383.1-201ENST00000428602 75 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 AC005534.2-201ENST00000431047 433 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 DUXAP8-207ENST00000456786 622 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 RPL31P3-201ENST00000458430 332 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 RPS26P55-201ENST00000471178 356 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGA1P17096 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.36□□□□□ -2.35
HMGA1P17096 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.36□□□□□ -2.35
HMGA1P17096 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGA1P17096 AP000238.1-201ENST00000608759 426 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 AC009233.1-201ENST00000616477 371 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 AC040168.1-201ENST00000623594 991 ntBASIC0.36□□□□□ -2.35
HMGA1P17096 AC138393.1-203ENST00000327086 343 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 Y_RNA.258-201ENST00000364613 105 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 RNU6-1226P-201ENST00000384317 107 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 MIR605-201ENST00000385078 83 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 MIR1283-2-201ENST00000408621 87 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGA1P17096 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 C1DP1-201ENST00000426049 402 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGA1P17096 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.35□□□□□ -2.35
HMGA1P17096 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGA1P17096 MRPS17P3-201ENST00000465453 385 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 HMGN2P9-201ENST00000476875 229 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 AC025465.3-201ENST00000510570 311 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 NRON-201ENST00000517270 370 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGA1P17096 AC012414.6-201ENST00000568241 401 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 AL589743.7-201ENST00000612637 233 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 AC073569.3-201ENST00000619055 682 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 OR4G3P-201ENST00000633500 913 ntBASIC0.35□□□□□ -2.35
HMGA1P17096 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
HMGA1P17096 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.34□□□□□ -2.35
HMGA1P17096 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
HMGA1P17096 RNU6-486P-201ENST00000363116 107 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 RNU6-251P-201ENST00000363235 104 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 RNA5SP501-201ENST00000410990 112 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 RPS26P5-201ENST00000418544 335 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AL358176.2-201ENST00000425769 204 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 CYP2C59P-201ENST00000457790 269 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 DEFB108D-201ENST00000527787 222 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGA1P17096 CYB5AP5-201ENST00000549779 389 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HMGA1P17096 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.34□□□□□ -2.36
HMGA1P17096 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGA1P17096 MIR4765-201ENST00000585007 77 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AC010615.3-201ENST00000597319 394 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AP000403.1-201ENST00000603349 851 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.34□□□□□ -2.36
HMGA1P17096 MIR6130-201ENST00000619419 109 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AC090772.4-201ENST00000623599 362 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AC008133.2-201ENST00000624540 351 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 Z69720.2-201ENST00000624755 279 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AC099654.5-201ENST00000636479 350 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AC023934.1-201ENST00000574529 2389 ntBASIC0.34□□□□□ -2.36
HMGA1P17096 AL049641.1-201ENST00000441055 1948 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HMGA1P17096 RNU6-452P-201ENST00000384406 107 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AL031577.2-201ENST00000404133 280 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms