Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.48□□□□□ -2.17
COL11A1P12107 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.48□□□□□ -2.17
COL11A1P12107 MIR4658-201ENST00000584344 65 ntBASIC1.48□□□□□ -2.17
COL11A1P12107 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.48□□□□□ -2.17
COL11A1P12107 AP000254.1-201ENST00000609934 520 ntBASIC1.48□□□□□ -2.17
COL11A1P12107 uc_338.12-201ENST00000616344 181 ntBASIC1.48□□□□□ -2.17
COL11A1P12107 AL357080.1-201ENST00000617394 239 ntBASIC1.48□□□□□ -2.17
COL11A1P12107 AC012640.5-201ENST00000623897 319 ntBASIC1.48□□□□□ -2.17
COL11A1P12107 AC103706.2-201ENST00000638080 240 ntBASIC1.48□□□□□ -2.17
COL11A1P12107 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL11A1P12107 RNU6-289P-201ENST00000364093 107 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 RNU6-723P-201ENST00000383973 107 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 RNU6-217P-201ENST00000384164 104 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 TXNP7-201ENST00000406296 293 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.47□□□□□ -2.17
COL11A1P12107 AC007742.1-201ENST00000425789 329 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.47□□□□□ -2.17
COL11A1P12107 ELOCP26-201ENST00000436067 329 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 RAC1P7-201ENST00000445367 377 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL11A1P12107 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 ARPC3P5-201ENST00000448802 534 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 AC034222.1-201ENST00000494052 532 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL11A1P12107 AC022483.1-201ENST00000514020 567 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 SNORA48.10-201ENST00000516965 160 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC022634.1-201ENST00000520765 532 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC068135.2-201ENST00000569293 1028 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 MTATP6P3-201ENST00000581686 676 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 MIR151B-201ENST00000584249 96 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC005498.1-201ENST00000592125 465 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC105129.3-201ENST00000605455 485 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC245297.2-201ENST00000610119 565 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL139418.1-201ENST00000613613 177 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL11A1P12107 MIR325-201ENST00000385260 98 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL356131.1-201ENST00000405826 414 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL953862.1-201ENST00000423016 168 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL445669.1-201ENST00000426743 755 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AL356867.1-201ENST00000429623 299 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 THAP5P1-201ENST00000439089 262 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 MTND4LP16-201ENST00000440828 295 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 RNU7-59P-201ENST00000459101 61 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.47□□□□□ -2.17
COL11A1P12107 RPL30P6-201ENST00000475925 342 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 EIF4EP3-201ENST00000498782 656 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.47□□□□□ -2.17
COL11A1P12107 AC010587.2-201ENST00000511727 448 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 RNU5F-8P-201ENST00000515941 111 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 AP005435.4-201ENST00000529514 284 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 CYCSP26-201ENST00000534107 320 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.47□□□□□ -2.17
COL11A1P12107 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.47□□□□□ -2.17
COL11A1P12107 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.47□□□□□ -2.17
COL11A1P12107 AL031176.1-201ENST00000604554 466 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 OR10AB1P-201ENST00000609613 938 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL11A1P12107 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.47□□□□□ -2.17
COL11A1P12107 AL356585.4-201ENST00000623078 1229 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 AC007671.2-201ENST00000637344 619 ntBASIC1.47□□□□□ -2.17
COL11A1P12107 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.17
COL11A1P12107 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL11A1P12107 RNU6-1155P-201ENST00000363554 107 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 Y_RNA.560-201ENST00000384689 102 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 RNY3P9-201ENST00000384727 106 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 HMGB1P17-201ENST00000403495 628 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 RNU6-920P-201ENST00000410926 92 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.46□□□□□ -2.18
COL11A1P12107 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.46□□□□□ -2.18
COL11A1P12107 MTCO2P5-201ENST00000422621 426 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 RPL7L1P10-201ENST00000427790 463 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.46□□□□□ -2.18
COL11A1P12107 MTND5P14-201ENST00000441481 1267 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 CALM1P1-201ENST00000442082 433 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AC244505.5-201ENST00000443639 207 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.46□□□□□ -2.18
COL11A1P12107 MTND3P7-201ENST00000474435 343 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.46□□□□□ -2.18
COL11A1P12107 AC104685.1-201ENST00000502445 371 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.46□□□□□ -2.18
COL11A1P12107 AC022447.3-201ENST00000506865 495 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
COL11A1P12107 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.46□□□□□ -2.18
COL11A1P12107 AC093677.1-201ENST00000514414 678 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 Y_RNA.717-201ENST00000517106 92 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 SNORA31.23-201ENST00000517219 133 ntBASIC1.46□□□□□ -2.18
COL11A1P12107 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.46□□□□□ -2.18
COL11A1P12107 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL11A1P12107 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL11A1P12107 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.46□□□□□ -2.18
COL11A1P12107 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms