Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
PCNAP12004 AC007560.1-201ENST00000426912 237 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.07□□□□□ -1.92
PCNAP12004 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.07□□□□□ -1.92
PCNAP12004 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.07□□□□□ -1.92
PCNAP12004 WASF1P1-201ENST00000447560 1131 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AL583843.1-201ENST00000456070 346 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.07□□□□□ -1.92
PCNAP12004 RNU2-69P-201ENST00000516061 100 ntBASIC3.07□□□□□ -1.92
PCNAP12004 RNU1-103P-201ENST00000516502 125 ntBASIC3.07□□□□□ -1.92
PCNAP12004 RNU6-572P-201ENST00000516724 80 ntBASIC3.07□□□□□ -1.92
PCNAP12004 SNORA31.19-201ENST00000517079 126 ntBASIC3.07□□□□□ -1.92
PCNAP12004 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.07□□□□□ -1.92
PCNAP12004 MIR4429-201ENST00000580105 73 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AC060780.3-201ENST00000589464 80 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AC008739.3-201ENST00000603262 127 ntBASIC3.07□□□□□ -1.92
PCNAP12004 ATP1B3P1-201ENST00000605365 821 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AC092807.2-201ENST00000609367 243 ntBASIC3.07□□□□□ -1.92
PCNAP12004 AC090617.10-201ENST00000624308 134 ntBASIC3.07□□□□□ -1.92
PCNAP12004 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCNAP12004 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCNAP12004 AL049781.1-201ENST00000623195 3585 ntBASIC3.07□□□□□ -1.92
PCNAP12004 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCNAP12004 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCNAP12004 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCNAP12004 Y_RNA.86-201ENST00000363020 111 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RNU6-778P-201ENST00000363269 103 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RNU6-522P-201ENST00000364497 107 ntBASIC3.06□□□□□ -1.92
PCNAP12004 Y_RNA.303-201ENST00000364998 94 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RNU6-395P-201ENST00000365662 106 ntBASIC3.06□□□□□ -1.92
PCNAP12004 MIR7-3-201ENST00000384898 110 ntBASIC3.06□□□□□ -1.92
PCNAP12004 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PCNAP12004 RNU6-876P-201ENST00000391295 104 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
PCNAP12004 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PCNAP12004 AL139413.1-201ENST00000421309 217 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
PCNAP12004 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.06□□□□□ -1.92
PCNAP12004 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.06□□□□□ -1.92
PCNAP12004 SRIP2-201ENST00000428470 166 ntBASIC3.06□□□□□ -1.92
PCNAP12004 YME1L1P1-201ENST00000429435 297 ntBASIC3.06□□□□□ -1.92
PCNAP12004 ERLEC1P1-201ENST00000433806 578 ntBASIC3.06□□□□□ -1.92
PCNAP12004 CALM1P1-201ENST00000442082 433 ntBASIC3.06□□□□□ -1.92
PCNAP12004 Z96811.1-201ENST00000445880 108 ntBASIC3.06□□□□□ -1.92
PCNAP12004 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.06□□□□□ -1.92
PCNAP12004 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.06□□□□□ -1.92
PCNAP12004 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.06□□□□□ -1.92
PCNAP12004 AL031183.1-201ENST00000457667 207 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
PCNAP12004 HMGN2P26-201ENST00000463169 339 ntBASIC3.06□□□□□ -1.92
PCNAP12004 DYNLL1P5-201ENST00000467158 270 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RPL31P58-201ENST00000469001 379 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.06□□□□□ -1.92
PCNAP12004 AC110794.1-201ENST00000505816 425 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AC018710.1-201ENST00000506509 158 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RNU1-86P-201ENST00000516108 154 ntBASIC3.06□□□□□ -1.92
PCNAP12004 Y_RNA.665-201ENST00000516177 98 ntBASIC3.06□□□□□ -1.92
PCNAP12004 RNU1-107P-201ENST00000516617 154 ntBASIC3.06□□□□□ -1.92
PCNAP12004 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCNAP12004 HSPE1P20-201ENST00000538133 289 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AL391261.3-201ENST00000557194 520 ntBASIC3.06□□□□□ -1.92
PCNAP12004 HMGB1P14-201ENST00000557424 591 ntBASIC3.06□□□□□ -1.92
PCNAP12004 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AC024220.1-201ENST00000603675 484 ntBASIC3.06□□□□□ -1.92
PCNAP12004 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.06□□□□□ -1.92
PCNAP12004 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.06□□□□□ -1.92
PCNAP12004 U2.21-201ENST00000637295 81 ntBASIC3.06□□□□□ -1.92
PCNAP12004 U6.99-201ENST00000637524 83 ntBASIC3.06□□□□□ -1.92
PCNAP12004 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PCNAP12004 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
PCNAP12004 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCNAP12004 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
PCNAP12004 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.05□□□□□ -1.92
PCNAP12004 RNU6-658P-201ENST00000384606 106 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RNA5SP219-201ENST00000390940 113 ntBASIC3.05□□□□□ -1.92
PCNAP12004 SNORA48.7-201ENST00000391302 135 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RPL21P75-201ENST00000396599 483 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RPL21P28-201ENST00000401418 483 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AL357075.1-201ENST00000404107 726 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AL356776.1-201ENST00000406574 447 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RN7SKP220-201ENST00000410611 288 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AL592148.1-201ENST00000413568 445 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.05□□□□□ -1.92
PCNAP12004 AL645937.1-202ENST00000421799 937 ntBASIC3.05□□□□□ -1.92
PCNAP12004 PRPS1P1-201ENST00000445305 876 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RPL21P39-201ENST00000463605 483 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RPL23AP11-201ENST00000475260 469 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC087190.1-201ENST00000484462 480 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC083904.1-201ENST00000487828 231 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC093591.1-201ENST00000491435 481 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.05□□□□□ -1.92
PCNAP12004 RPL21P129-201ENST00000491732 478 ntBASIC3.05□□□□□ -1.92
PCNAP12004 RPL21P16-201ENST00000495531 483 ntBASIC3.05□□□□□ -1.92
PCNAP12004 PRDX4P1-201ENST00000507189 574 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
PCNAP12004 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.05□□□□□ -1.92
PCNAP12004 AF235103.2-201ENST00000525753 346 ntBASIC3.05□□□□□ -1.92
PCNAP12004 CENPUP1-201ENST00000526649 1202 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.05□□□□□ -1.92
PCNAP12004 AC023050.3-201ENST00000541142 333 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms