Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR524-201ENST00000385242 87 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 MIR147B-201ENST00000390185 80 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL360182.1-201ENST00000397433 468 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 RNU6-195P-201ENST00000411352 109 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 HMGN2P38-201ENST00000423806 265 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 RPL7P34-201ENST00000433316 712 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 MTND6P13-201ENST00000443510 523 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL078601.1-201ENST00000444542 271 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC022493.1-201ENST00000492984 337 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC023194.1-201ENST00000493084 308 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC010486.2-201ENST00000505572 483 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 MTND4P2-201ENST00000507767 1203 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC117522.2-201ENST00000510049 657 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 ACA59.2-201ENST00000517061 156 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC060788.1-201ENST00000521318 469 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC135279.1-201ENST00000543493 504 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 OR11H5P-201ENST00000554039 926 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 MIR5571-201ENST00000577998 113 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC012360.2-201ENST00000609349 391 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 uc_338.14-201ENST00000613162 166 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC010378.1-201ENST00000619270 362 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC098657.3-201ENST00000620434 263 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AL603839.4-201ENST00000624658 1005 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 Y_RNA.22-201ENST00000362492 102 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RNU4-21P-201ENST00000362802 126 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 SNORD3E-201ENST00000362899 217 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 SNORA80A-201ENST00000363922 136 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RNU6-169P-201ENST00000365336 107 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 SNORA24.1-201ENST00000384401 135 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 MIR558-201ENST00000384920 94 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 MT-TH-201ENST00000387441 69 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RPS3AP36-201ENST00000398190 775 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RNA5SP184-201ENST00000411071 108 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC127391.1-201ENST00000411737 98 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AL031779.1-201ENST00000415663 330 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC016831.2-201ENST00000417179 352 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 DYNLL1P5-201ENST00000467158 270 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RBBP4P6-201ENST00000508098 202 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC108078.2-201ENST00000510750 236 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RNU6-123P-201ENST00000516163 102 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC012213.3-201ENST00000577199 777 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC002984.1-201ENST00000591692 448 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 BNIP3P8-201ENST00000597863 560 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 DEFB131E-202ENST00000602581 683 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC010678.1-201ENST00000614118 713 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AL359854.1-201ENST00000614203 1594 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AL133173.2-201ENST00000614270 90 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC009090.3-201ENST00000616553 565 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 MIR6766-201ENST00000622641 72 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC120349.3-201ENST00000624377 529 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AL160394.1-201ENST00000624765 724 ntBASIC1.7□□□□□ -2.14
HLA-DQA1P01909 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DQA1P01909 AC016717.2-201ENST00000609089 5141 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC103710.2-202ENST00000641454 2853 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 AC062016.1-201ENST00000355719 319 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RNY4P34-201ENST00000364779 95 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RNA5SP125-201ENST00000364843 120 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 OR5H15-201ENST00000383696 930 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 SNORA20.2-201ENST00000383922 131 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RNU5A-2P-201ENST00000384337 116 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 MIR27B-201ENST00000385129 97 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 CISD1P1-201ENST00000393907 327 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 CIR1P3-201ENST00000405137 479 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 FTH1P15-201ENST00000406984 280 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RNU2-39P-201ENST00000410604 198 ntBASIC1.69□□□□□ -2.14
HLA-DQA1P01909 RPS3AP3-201ENST00000411933 242 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms