Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RN7SKP192-201ENST00000411291 327 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.08□□□□□ -2.08
CLDN9O95484 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 RPL7P12-201ENST00000446719 750 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC068781.1-201ENST00000488231 618 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AF131216.2-201ENST00000512316 564 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC008549.1-201ENST00000512900 643 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 RNU2-10P-201ENST00000516375 211 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 RNU6-678P-201ENST00000516832 109 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC011979.2-201ENST00000527568 352 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN9O95484 AL157871.3-201ENST00000557231 293 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC012213.3-201ENST00000577199 777 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 MIR3118-1-201ENST00000581787 76 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC092953.2-201ENST00000608000 699 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.08□□□□□ -2.08
CLDN9O95484 AP000240.1-201ENST00000609910 452 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AC024581.2-201ENST00000619986 252 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 ZNF72P-201ENST00000425869 1908 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 CKAP2P1-201ENST00000555477 2049 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 AL445523.1-201ENST00000451184 1362 ntBASIC2.08□□□□□ -2.08
CLDN9O95484 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CLDN9O95484 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN9O95484 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN9O95484 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN9O95484 RNU5F-6P-201ENST00000362979 116 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 RNU6-1214P-201ENST00000363650 109 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AL133475.1-201ENST00000404414 305 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 MIR1302-8-201ENST00000408342 128 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC097463.2-201ENST00000421074 142 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN9O95484 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN9O95484 AL591704.1-201ENST00000432574 275 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 RPS15AP9-201ENST00000439856 381 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN9O95484 AL118520.1-201ENST00000450770 291 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 MTND1P12-201ENST00000455231 147 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC112771.1-201ENST00000463581 102 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN9O95484 MTND2P14-201ENST00000482139 351 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 RPS3AP22-201ENST00000488297 769 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC112204.1-201ENST00000502591 103 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 FAM92A1P2-202ENST00000504766 877 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 MRPS33P3-201ENST00000513456 322 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 OR11H5P-201ENST00000554039 926 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC091489.2-201ENST00000566263 604 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC009127.3-201ENST00000570531 403 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN9O95484 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN9O95484 AL138963.2-201ENST00000605137 226 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AC105129.3-201ENST00000605455 485 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 AL355816.2-201ENST00000610049 647 ntBASIC2.07□□□□□ -2.08
CLDN9O95484 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN9O95484 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN9O95484 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CLDN9O95484 MTND5P6-201ENST00000422338 1798 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN9O95484 Y_RNA.33-201ENST00000362591 102 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 RNU6-501P-201ENST00000364072 100 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 RNU4-28P-201ENST00000364739 141 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 SNORA40C-201ENST00000391285 128 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLDN9O95484 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN9O95484 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN9O95484 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN9O95484 AL008629.1-201ENST00000438615 184 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 PGBD4P3-201ENST00000440731 581 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 AL591719.1-201ENST00000444669 744 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 AL606517.1-201ENST00000446914 387 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN9O95484 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN9O95484 FABP5P13-201ENST00000452144 328 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 AC090515.1-201ENST00000465295 476 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN9O95484 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN9O95484 AC109927.2-201ENST00000506416 303 ntBASIC2.06□□□□□ -2.08
CLDN9O95484 AF213884.2-201ENST00000510417 903 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms