Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 MIR218-1-201ENST00000384999 110 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.39□□□□□ -2.03
SDC3O75056 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC3O75056 BX276092.3-201ENST00000424182 230 ntBASIC2.39□□□□□ -2.03
SDC3O75056 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
SDC3O75056 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC3O75056 AL139415.2-201ENST00000431968 163 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC104850.1-201ENST00000435940 476 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AL136380.1-201ENST00000447970 162 ntBASIC2.39□□□□□ -2.03
SDC3O75056 HMGN2P10-201ENST00000448085 265 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC3O75056 AC233279.1-201ENST00000455300 423 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC109927.2-201ENST00000506416 303 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC3O75056 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.39□□□□□ -2.03
SDC3O75056 SNORA31.6-201ENST00000516241 130 ntBASIC2.39□□□□□ -2.03
SDC3O75056 RNA5SP281-201ENST00000516504 135 ntBASIC2.39□□□□□ -2.03
SDC3O75056 RNU6-914P-201ENST00000516749 109 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.39□□□□□ -2.03
SDC3O75056 OR5B19P-201ENST00000531766 928 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.39□□□□□ -2.03
SDC3O75056 AC006199.1-201ENST00000548728 219 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.39□□□□□ -2.03
SDC3O75056 AC023824.2-201ENST00000566185 400 ntBASIC2.39□□□□□ -2.03
SDC3O75056 MIR4658-201ENST00000584344 65 ntBASIC2.39□□□□□ -2.03
SDC3O75056 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.39□□□□□ -2.03
SDC3O75056 AL391813.1-201ENST00000603098 260 ntBASIC2.39□□□□□ -2.03
SDC3O75056 AC008250.2-201ENST00000615261 205 ntBASIC2.39□□□□□ -2.03
SDC3O75056 CU459211.1-201ENST00000635667 749 ntBASIC2.39□□□□□ -2.03
SDC3O75056 Z99571.1-201ENST00000636677 394 ntBASIC2.39□□□□□ -2.03
SDC3O75056 MIR3974-201ENST00000637126 96 ntBASIC2.39□□□□□ -2.03
SDC3O75056 U6.99-201ENST00000637524 83 ntBASIC2.39□□□□□ -2.03
SDC3O75056 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
SDC3O75056 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
SDC3O75056 MTND4P35-201ENST00000604257 1375 ntBASIC2.38□□□□□ -2.03
SDC3O75056 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.38□□□□□ -2.03
SDC3O75056 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
SDC3O75056 RNU1-91P-201ENST00000364746 163 ntBASIC2.38□□□□□ -2.03
SDC3O75056 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC3O75056 SNORA20.2-201ENST00000383922 131 ntBASIC2.38□□□□□ -2.03
SDC3O75056 RNU6-190P-201ENST00000384154 102 ntBASIC2.38□□□□□ -2.03
SDC3O75056 RNU6-297P-201ENST00000384636 107 ntBASIC2.38□□□□□ -2.03
SDC3O75056 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
SDC3O75056 RNU6-248P-201ENST00000410720 107 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC3O75056 AC090960.1-201ENST00000421072 306 ntBASIC2.38□□□□□ -2.03
SDC3O75056 MTCO3P30-201ENST00000426425 670 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC3O75056 AL161651.1-201ENST00000440882 223 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AL022238.1-201ENST00000442557 355 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDC3O75056 GAPDHP17-201ENST00000449858 1001 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC093899.1-201ENST00000457984 376 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC3O75056 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC3O75056 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC3O75056 Vault.3-201ENST00000516676 95 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC009902.1-201ENST00000519351 183 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC3O75056 AP003072.2-201ENST00000527756 676 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AP000873.5-201ENST00000533906 236 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AL121821.2-201ENST00000556081 394 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC3O75056 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC3O75056 AC009163.5-201ENST00000575421 637 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDC3O75056 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.38□□□□□ -2.03
SDC3O75056 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.38□□□□□ -2.03
SDC3O75056 NRBF2P1-201ENST00000587407 859 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC073544.2-201ENST00000601155 540 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AL590229.1-201ENST00000603497 542 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC104237.2-201ENST00000612456 443 ntBASIC2.38□□□□□ -2.03
SDC3O75056 AC130324.3-201ENST00000614165 542 ntBASIC2.38□□□□□ -2.03
SDC3O75056 HMGB1P24-202ENST00000615653 685 ntBASIC2.38□□□□□ -2.03
SDC3O75056 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SDC3O75056 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.38□□□□□ -2.03
SDC3O75056 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SDC3O75056 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SDC3O75056 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SDC3O75056 Y_RNA.22-201ENST00000362492 102 ntBASIC2.37□□□□□ -2.03
SDC3O75056 RNY1P12-201ENST00000364251 105 ntBASIC2.37□□□□□ -2.03
SDC3O75056 RNU6-169P-201ENST00000365336 107 ntBASIC2.37□□□□□ -2.03
SDC3O75056 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
SDC3O75056 RNU2-39P-201ENST00000410604 198 ntBASIC2.37□□□□□ -2.03
SDC3O75056 RN7SKP192-201ENST00000411291 327 ntBASIC2.37□□□□□ -2.03
SDC3O75056 AC127391.1-201ENST00000411737 98 ntBASIC2.37□□□□□ -2.03
SDC3O75056 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
SDC3O75056 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.37□□□□□ -2.03
SDC3O75056 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.37□□□□□ -2.03
SDC3O75056 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.37□□□□□ -2.03
SDC3O75056 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.37□□□□□ -2.03
SDC3O75056 RPL23AP30-201ENST00000432419 501 ntBASIC2.37□□□□□ -2.03
SDC3O75056 AC098826.1-201ENST00000433943 471 ntBASIC2.37□□□□□ -2.03
SDC3O75056 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
SDC3O75056 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.37□□□□□ -2.03
SDC3O75056 UBL5P3-201ENST00000475112 231 ntBASIC2.37□□□□□ -2.03
SDC3O75056 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.37□□□□□ -2.03
SDC3O75056 AC010486.3-201ENST00000511602 785 ntBASIC2.37□□□□□ -2.03
SDC3O75056 SNORD19.2-201ENST00000516978 73 ntBASIC2.37□□□□□ -2.03
SDC3O75056 RNU6-1315P-201ENST00000517187 99 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms