Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR5680-201ENST00000577577 84 ntBASIC2.62□□□□□ -1.99
SNX3O60493 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
SNX3O60493 AC020895.1-201ENST00000595362 272 ntBASIC2.62□□□□□ -1.99
SNX3O60493 AL645944.1-201ENST00000603857 493 ntBASIC2.62□□□□□ -1.99
SNX3O60493 AP001596.2-201ENST00000608410 312 ntBASIC2.62□□□□□ -1.99
SNX3O60493 AC073534.2-201ENST00000620377 381 ntBASIC2.62□□□□□ -1.99
SNX3O60493 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX3O60493 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX3O60493 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX3O60493 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.62□□□□□ -1.99
SNX3O60493 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SNX3O60493 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.61□□□□□ -1.99
SNX3O60493 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNX3O60493 AC093536.2-201ENST00000565257 1406 ntBASIC2.61□□□□□ -1.99
SNX3O60493 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNX3O60493 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNX3O60493 MIR412-201ENST00000362142 91 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AL122016.1-201ENST00000403365 367 ntBASIC2.61□□□□□ -1.99
SNX3O60493 RNU4-46P-201ENST00000410818 138 ntBASIC2.61□□□□□ -1.99
SNX3O60493 Y_RNA.623-201ENST00000411128 95 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AL592148.1-201ENST00000413568 445 ntBASIC2.61□□□□□ -1.99
SNX3O60493 RPLP0P7-201ENST00000416050 667 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNX3O60493 MTCYBP8-201ENST00000422855 651 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX3O60493 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNX3O60493 CYCSP35-201ENST00000451978 304 ntBASIC2.61□□□□□ -1.99
SNX3O60493 FAM133DP-201ENST00000464802 691 ntBASIC2.61□□□□□ -1.99
SNX3O60493 MTCO3P9-201ENST00000506989 781 ntBASIC2.61□□□□□ -1.99
SNX3O60493 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX3O60493 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.61□□□□□ -1.99
SNX3O60493 RNU6-720P-201ENST00000516363 108 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.61□□□□□ -1.99
SNX3O60493 AP003034.1-201ENST00000534621 422 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX3O60493 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.61□□□□□ -1.99
SNX3O60493 AL121821.2-201ENST00000556081 394 ntBASIC2.61□□□□□ -1.99
SNX3O60493 MIR5092-201ENST00000583139 88 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
SNX3O60493 AC011471.1-201ENST00000585766 187 ntBASIC2.61□□□□□ -1.99
SNX3O60493 RPL23AP88-201ENST00000605759 454 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX3O60493 MIR6134-201ENST00000617606 109 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AL354950.2-201ENST00000617939 290 ntBASIC2.61□□□□□ -1.99
SNX3O60493 uc_338.11-201ENST00000619132 160 ntBASIC2.61□□□□□ -1.99
SNX3O60493 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
SNX3O60493 AL359880.1-201ENST00000621879 266 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX3O60493 AC099654.12-201ENST00000639868 649 ntBASIC2.61□□□□□ -1.99
SNX3O60493 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNX3O60493 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNX3O60493 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SNX3O60493 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNX3O60493 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNX3O60493 Y_RNA.3-201ENST00000362331 103 ntBASIC2.6□□□□□ -1.99
SNX3O60493 RNU6-996P-201ENST00000365438 107 ntBASIC2.6□□□□□ -1.99
SNX3O60493 MIR449B-201ENST00000384995 97 ntBASIC2.6□□□□□ -1.99
SNX3O60493 MIR518D-201ENST00000385014 87 ntBASIC2.6□□□□□ -1.99
SNX3O60493 RNU6-903P-201ENST00000391270 109 ntBASIC2.6□□□□□ -1.99
SNX3O60493 RNU2-29P-201ENST00000410423 189 ntBASIC2.6□□□□□ -1.99
SNX3O60493 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNX3O60493 ATG3P1-201ENST00000419507 911 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AL358075.3-201ENST00000426289 226 ntBASIC2.6□□□□□ -1.99
SNX3O60493 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX3O60493 AL159987.2-201ENST00000432754 307 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX3O60493 FDX1P2-201ENST00000450769 375 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC092001.1-201ENST00000453012 261 ntBASIC2.6□□□□□ -1.99
SNX3O60493 SRRM1P2-201ENST00000464531 1192 ntBASIC2.6□□□□□ -1.99
SNX3O60493 GMFBP1-201ENST00000467831 427 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC008716.1-201ENST00000511084 513 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC113155.1-201ENST00000511141 769 ntBASIC2.6□□□□□ -1.99
SNX3O60493 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AP001893.2-201ENST00000526949 202 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.6□□□□□ -1.99
SNX3O60493 AC025678.1-201ENST00000567861 338 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX3O60493 MIR5692A1-201ENST00000580523 69 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC073539.2-201ENST00000597113 165 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC010620.2-201ENST00000600135 313 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AP001330.5-201ENST00000607176 411 ntBASIC2.6□□□□□ -1.99
SNX3O60493 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX3O60493 U6.42-201ENST00000618440 107 ntBASIC2.6□□□□□ -1.99
SNX3O60493 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNX3O60493 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX3O60493 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNX3O60493 AC006020.1-201ENST00000420179 1854 ntBASIC2.6□□□□□ -1.99
SNX3O60493 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SNX3O60493 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SNX3O60493 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -1.99
SNX3O60493 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SNX3O60493 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SNX3O60493 AL139276.1-201ENST00000311910 1001 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RNU6-552P-201ENST00000362869 119 ntBASIC2.59□□□□□ -1.99
SNX3O60493 SNORD14B-201ENST00000364533 90 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RNU6-715P-201ENST00000365204 103 ntBASIC2.59□□□□□ -1.99
SNX3O60493 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SNX3O60493 U3.37-201ENST00000408528 213 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC096649.2-201ENST00000416186 393 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms