Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.93□□□□□ -1.94
ZIC3O60481 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.93□□□□□ -1.94
ZIC3O60481 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.93□□□□□ -1.94
ZIC3O60481 AC117503.1-201ENST00000472241 394 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC011005.2-201ENST00000487324 359 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.93□□□□□ -1.94
ZIC3O60481 TBCAP3-201ENST00000512475 312 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.93□□□□□ -1.94
ZIC3O60481 RNU6-1069P-201ENST00000516612 133 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 RNU7-30P-201ENST00000516835 62 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 SNORA31.19-201ENST00000517079 126 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 NDUFB9P3-201ENST00000521269 501 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
ZIC3O60481 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.93□□□□□ -1.94
ZIC3O60481 SCOCP1-201ENST00000554676 349 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.93□□□□□ -1.94
ZIC3O60481 AC091135.1-201ENST00000585943 307 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC008962.1-201ENST00000605729 304 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC002044.1-201ENST00000606707 158 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AL357078.3-201ENST00000607528 618 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AL121757.2-201ENST00000611223 313 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC063943.3-201ENST00000615562 356 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC068831.7-201ENST00000616954 363 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 MIR3651-201ENST00000630427 90 ntBASIC2.93□□□□□ -1.94
ZIC3O60481 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.93□□□□□ -1.94
ZIC3O60481 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZIC3O60481 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZIC3O60481 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZIC3O60481 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.93□□□□□ -1.94
ZIC3O60481 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZIC3O60481 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.93□□□□□ -1.94
ZIC3O60481 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
ZIC3O60481 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.92□□□□□ -1.94
ZIC3O60481 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
ZIC3O60481 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZIC3O60481 RNU6-778P-201ENST00000363269 103 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 SNORA38.1-201ENST00000364172 131 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC099548.1-201ENST00000421443 426 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AL353678.1-201ENST00000422735 741 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 SKA2P1-201ENST00000425592 390 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC098614.2-201ENST00000426040 255 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.92□□□□□ -1.94
ZIC3O60481 AL353705.1-201ENST00000433468 480 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC010401.1-201ENST00000463867 348 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 RPL30P14-201ENST00000482744 348 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 HMGB1P30-201ENST00000492455 606 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.92□□□□□ -1.94
ZIC3O60481 RN7SL504P-201ENST00000494496 287 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 SNORA19.2-201ENST00000516013 114 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 RNU6-864P-201ENST00000516256 108 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.92□□□□□ -1.94
ZIC3O60481 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.92□□□□□ -1.94
ZIC3O60481 CYCSP27-201ENST00000527643 293 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AP000763.2-201ENST00000540641 163 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.92□□□□□ -1.94
ZIC3O60481 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.92□□□□□ -1.94
ZIC3O60481 MIR3186-201ENST00000577404 85 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 MIR5692C1-201ENST00000585309 91 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.92□□□□□ -1.94
ZIC3O60481 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.92□□□□□ -1.94
ZIC3O60481 FAM157A-202ENST00000615155 405 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 Y_RNA.804-201ENST00000615262 101 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.92□□□□□ -1.94
ZIC3O60481 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
ZIC3O60481 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
ZIC3O60481 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZIC3O60481 FAM35BP-202ENST00000497389 3337 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 AC005183.1-201ENST00000603687 1979 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZIC3O60481 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZIC3O60481 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZIC3O60481 AL136164.4-201ENST00000625013 2135 ntBASIC2.92□□□□□ -1.94
ZIC3O60481 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZIC3O60481 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZIC3O60481 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ZIC3O60481 AC007496.3-201ENST00000624987 3443 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
ZIC3O60481 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZIC3O60481 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
ZIC3O60481 Y_RNA.142-201ENST00000363491 102 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 SNORD113-7-201ENST00000363762 77 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 RNU6-884P-201ENST00000363889 107 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 RNU6-266P-201ENST00000364225 107 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 SNORD14B-201ENST00000364533 90 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 Y_RNA.263-201ENST00000364659 114 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 Y_RNA.301-201ENST00000364990 103 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AP002088.1-201ENST00000382740 395 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 RNU6-166P-201ENST00000384371 107 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 MIR888-201ENST00000401186 77 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.91□□□□□ -1.94
ZIC3O60481 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZIC3O60481 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 HMGN2P20-201ENST00000437531 273 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 CST9LP2-201ENST00000437612 320 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 AL583843.1-201ENST00000456070 346 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 MTND1P11-201ENST00000456661 876 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms