Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.64□□□□□ -1.67
GRIN3BO60391 MIR4276-201ENST00000584832 70 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 RPL12P50-201ENST00000603116 116 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AC005014.2-201ENST00000607795 599 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.64□□□□□ -1.67
GRIN3BO60391 LINC00901.1-201ENST00000617252 152 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AC137590.2-201ENST00000619709 240 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AL360181.4-201ENST00000621752 134 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 AL512643.1-201ENST00000635735 524 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 Z99571.1-201ENST00000636677 394 ntBASIC4.64□□□□□ -1.67
GRIN3BO60391 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.64□□□□□ -1.67
GRIN3BO60391 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.64□□□□□ -1.67
GRIN3BO60391 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
GRIN3BO60391 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
GRIN3BO60391 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
GRIN3BO60391 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
GRIN3BO60391 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
GRIN3BO60391 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.63□□□□□ -1.67
GRIN3BO60391 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
GRIN3BO60391 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
GRIN3BO60391 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
GRIN3BO60391 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
GRIN3BO60391 AC007685.1-201ENST00000329806 452 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 RNU1-15P-201ENST00000353977 144 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 Y_RNA.257-201ENST00000364596 102 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 RNU6-7-201ENST00000364784 107 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 RNU6-8-201ENST00000365467 107 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 Y_RNA.455-201ENST00000384230 98 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 Y_RNA.527-201ENST00000384573 102 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 Y_RNA.557-201ENST00000384680 107 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 MIR199A2-201ENST00000385289 110 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.63□□□□□ -1.67
GRIN3BO60391 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.63□□□□□ -1.67
GRIN3BO60391 AC093151.1-201ENST00000427711 313 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 SNORD108-201ENST00000459332 71 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 KC877373.1-201ENST00000479066 408 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AC097462.2-201ENST00000504623 481 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 SCARNA15.2-201ENST00000516409 127 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 RNA5SP471-201ENST00000516971 106 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.63□□□□□ -1.67
GRIN3BO60391 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GRIN3BO60391 AL161670.1-201ENST00000554348 137 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.63□□□□□ -1.67
GRIN3BO60391 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.63□□□□□ -1.67
GRIN3BO60391 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.63□□□□□ -1.67
GRIN3BO60391 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.63□□□□□ -1.67
GRIN3BO60391 MIR3921-201ENST00000577308 85 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 MIR4672-201ENST00000583126 81 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 OR1M4P-201ENST00000589199 287 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AC098826.3-201ENST00000603823 466 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AC006023.1-201ENST00000603944 259 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 AL591516.1-201ENST00000611326 274 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.63□□□□□ -1.67
GRIN3BO60391 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.63□□□□□ -1.67
GRIN3BO60391 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.63□□□□□ -1.67
GRIN3BO60391 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.63□□□□□ -1.67
GRIN3BO60391 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
GRIN3BO60391 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
GRIN3BO60391 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
GRIN3BO60391 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
GRIN3BO60391 AC092435.4-201ENST00000623012 4159 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
GRIN3BO60391 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
GRIN3BO60391 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
GRIN3BO60391 AC005592.1-201ENST00000566527 1640 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
GRIN3BO60391 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
GRIN3BO60391 SNORD9-201ENST00000362566 104 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 RNU6-1167P-201ENST00000363227 94 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 Y_RNA.151-201ENST00000363566 112 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 RNU6-395P-201ENST00000365662 106 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 RPS15AP6-201ENST00000420703 385 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AC099799.1-201ENST00000439809 192 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 DAP3P1-201ENST00000441522 278 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.62□□□□□ -1.67
GRIN3BO60391 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.62□□□□□ -1.67
GRIN3BO60391 RPL27AP5-201ENST00000469428 449 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 RPS20P22-201ENST00000473700 357 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AC022493.1-201ENST00000492984 337 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 HMGB1P22-201ENST00000505315 124 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 PHBP14-201ENST00000512887 367 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.62□□□□□ -1.67
GRIN3BO60391 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.62□□□□□ -1.67
GRIN3BO60391 AL157871.3-201ENST00000557231 293 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 SUB1P3-201ENST00000564581 315 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.62□□□□□ -1.67
GRIN3BO60391 MYL12BP1-201ENST00000569826 507 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AC002545.1-201ENST00000592511 181 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AL161798.1-201ENST00000604630 131 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 PRR13P7-201ENST00000605538 430 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 AL162274.2-201ENST00000614406 332 ntBASIC4.62□□□□□ -1.67
GRIN3BO60391 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GRIN3BO60391 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.61□□□□□ -1.67
GRIN3BO60391 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GRIN3BO60391 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms