Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC118273.2-201ENST00000532092 465 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC233702.2-202ENST00000562547 291 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 BNIP3P27-201ENST00000599991 412 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 BNIP3P26-201ENST00000600827 554 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AL606834.3-201ENST00000602615 496 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AL138963.2-201ENST00000605137 226 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC126118.1-201ENST00000607744 628 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AL133445.2-201ENST00000611191 527 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 LINC02211-204ENST00000642024 1070 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AL359854.1-201ENST00000614203 1594 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.42□□□□□ -2.18
UBFD1O14562 AL391987.6-201ENST00000305671 199 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 RNA5SP276-201ENST00000362580 94 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 Y_RNA.122-201ENST00000363331 96 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 RNU1-57P-201ENST00000384491 166 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 RNU6-19P-201ENST00000384718 107 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.42□□□□□ -2.18
UBFD1O14562 ISCA1P1-201ENST00000426679 387 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 USP9YP11-201ENST00000427537 717 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AL117351.1-201ENST00000438864 766 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AL360221.1-201ENST00000445989 335 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 MTCO1P27-201ENST00000448269 226 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.42□□□□□ -2.18
UBFD1O14562 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.42□□□□□ -2.18
UBFD1O14562 FO393415.2-201ENST00000480085 343 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AC140059.1-201ENST00000489238 361 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AC091965.2-201ENST00000512324 613 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 SNORD19.2-201ENST00000516978 73 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 RN7SKP258-201ENST00000517151 304 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.42□□□□□ -2.18
UBFD1O14562 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.42□□□□□ -2.18
UBFD1O14562 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.42□□□□□ -2.18
UBFD1O14562 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.42□□□□□ -2.18
UBFD1O14562 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.42□□□□□ -2.18
UBFD1O14562 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
UBFD1O14562 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.42□□□□□ -2.18
UBFD1O14562 AC068276.1-201ENST00000605793 379 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AC106052.1-201ENST00000608029 497 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.42□□□□□ -2.18
UBFD1O14562 AL136313.1-201ENST00000624804 202 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 AC097655.1-201ENST00000635075 318 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 MTND5P33-201ENST00000571250 1450 ntBASIC1.42□□□□□ -2.18
UBFD1O14562 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UBFD1O14562 ZNF702P-202ENST00000434269 1966 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC008555.8-201ENST00000623602 2168 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 MTND5P30-201ENST00000452896 1731 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 NACAP2-201ENST00000318548 624 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 RNU6-560P-201ENST00000364007 108 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 RNU6-188P-201ENST00000364207 107 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 MIR19A-201ENST00000384878 82 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC119751.3-201ENST00000399720 670 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AL359634.1-202ENST00000404721 284 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 OR51A5P-201ENST00000415429 942 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC074117.2-201ENST00000417130 397 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AL513185.2-201ENST00000425543 193 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.41□□□□□ -2.18
UBFD1O14562 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.41□□□□□ -2.18
UBFD1O14562 VN1R108P-201ENST00000431580 830 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.41□□□□□ -2.18
UBFD1O14562 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.41□□□□□ -2.18
UBFD1O14562 MTCO2P25-201ENST00000447065 681 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC092001.1-201ENST00000453012 261 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 RPL21P134-201ENST00000453468 483 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.41□□□□□ -2.18
UBFD1O14562 AC107032.1-201ENST00000485945 480 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.41□□□□□ -2.18
UBFD1O14562 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.41□□□□□ -2.18
UBFD1O14562 AP004607.1-201ENST00000524456 203 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 LRRC6P1-201ENST00000532188 885 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.41□□□□□ -2.18
UBFD1O14562 AC093012.1-202ENST00000549403 582 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC012435.1-202ENST00000568772 240 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC090079.2-201ENST00000575289 768 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AC103987.3-201ENST00000582071 292 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.41□□□□□ -2.18
UBFD1O14562 uc_338.14-201ENST00000613162 166 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
UBFD1O14562 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UBFD1O14562 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
UBFD1O14562 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
UBFD1O14562 WWP1P1-201ENST00000466609 2769 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UBFD1O14562 RNU6-486P-201ENST00000363116 107 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 Y_RNA.224-201ENST00000364308 111 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 RNU6-621P-201ENST00000364752 109 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 MIR147B-201ENST00000390185 80 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
UBFD1O14562 AL133475.1-201ENST00000404414 305 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 AL356432.1-201ENST00000405809 419 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 RPS15AP12-201ENST00000419498 388 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 AC096920.1-201ENST00000423991 241 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 AIMP1P2-201ENST00000425294 312 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 AC016691.1-201ENST00000441321 413 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 ELOCP30-201ENST00000447108 299 ntBASIC1.4□□□□□ -2.19
UBFD1O14562 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms