Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.55□□□□□ -2
E2F3O00716 RPS3P1-201ENST00000456781 192 ntBASIC2.55□□□□□ -2
E2F3O00716 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.55□□□□□ -2
E2F3O00716 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.55□□□□□ -2
E2F3O00716 RNA5SP165-201ENST00000517142 115 ntBASIC2.55□□□□□ -2
E2F3O00716 RN7SKP258-201ENST00000517151 304 ntBASIC2.55□□□□□ -2
E2F3O00716 HMGB1P41-201ENST00000520234 440 ntBASIC2.55□□□□□ -2
E2F3O00716 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.55□□□□□ -2
E2F3O00716 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
E2F3O00716 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
E2F3O00716 AC135279.1-201ENST00000543493 504 ntBASIC2.55□□□□□ -2
E2F3O00716 NACAP3-201ENST00000552100 481 ntBASIC2.55□□□□□ -2
E2F3O00716 AC234778.2-201ENST00000566241 354 ntBASIC2.55□□□□□ -2
E2F3O00716 MIR3167-201ENST00000579623 85 ntBASIC2.55□□□□□ -2
E2F3O00716 AC024619.4-201ENST00000580924 316 ntBASIC2.55□□□□□ -2
E2F3O00716 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
E2F3O00716 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
E2F3O00716 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
E2F3O00716 AC004223.2-201ENST00000590309 544 ntBASIC2.55□□□□□ -2
E2F3O00716 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
E2F3O00716 AC087683.1-201ENST00000591187 441 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.6-201ENST00000603753 252 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.11-201ENST00000604059 253 ntBASIC2.55□□□□□ -2
E2F3O00716 AC008162.1-201ENST00000604718 254 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.1-201ENST00000604752 252 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.5-201ENST00000605253 252 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.12-201ENST00000605291 253 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.8-201ENST00000605353 252 ntBASIC2.55□□□□□ -2
E2F3O00716 AL670379.7-201ENST00000605823 252 ntBASIC2.55□□□□□ -2
E2F3O00716 AL451064.1-201ENST00000607718 471 ntBASIC2.55□□□□□ -2
E2F3O00716 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
E2F3O00716 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.55□□□□□ -2
E2F3O00716 AC091834.1-201ENST00000614543 472 ntBASIC2.55□□□□□ -2
E2F3O00716 HMGB1P24-202ENST00000615653 685 ntBASIC2.55□□□□□ -2
E2F3O00716 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
E2F3O00716 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.54□□□□□ -2
E2F3O00716 RNU5E-6P-201ENST00000365574 115 ntBASIC2.54□□□□□ -2
E2F3O00716 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
E2F3O00716 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
E2F3O00716 MIR524-201ENST00000385242 87 ntBASIC2.54□□□□□ -2
E2F3O00716 MTCO3P41-201ENST00000414801 328 ntBASIC2.54□□□□□ -2
E2F3O00716 PIGFP2-201ENST00000421400 651 ntBASIC2.54□□□□□ -2
E2F3O00716 MTCO3P30-201ENST00000426425 670 ntBASIC2.54□□□□□ -2
E2F3O00716 AC093106.2-201ENST00000428212 385 ntBASIC2.54□□□□□ -2
E2F3O00716 HMGB1P27-201ENST00000431429 603 ntBASIC2.54□□□□□ -2
E2F3O00716 MYL8P-204ENST00000431574 518 ntBASIC2.54□□□□□ -2
E2F3O00716 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.54□□□□□ -2
E2F3O00716 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.54□□□□□ -2
E2F3O00716 RPL37P6-201ENST00000460682 294 ntBASIC2.54□□□□□ -2
E2F3O00716 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.54□□□□□ -2
E2F3O00716 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
E2F3O00716 AC022616.3-201ENST00000523940 148 ntBASIC2.54□□□□□ -2
E2F3O00716 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
E2F3O00716 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
E2F3O00716 AC091805.2-201ENST00000603848 235 ntBASIC2.54□□□□□ -2
E2F3O00716 AL161798.1-201ENST00000604630 131 ntBASIC2.54□□□□□ -2
E2F3O00716 AC139792.2-201ENST00000624218 587 ntBASIC2.54□□□□□ -2
E2F3O00716 MIR3199-2-201ENST00000636243 86 ntBASIC2.54□□□□□ -2
E2F3O00716 MTND4P27-201ENST00000450813 1354 ntBASIC2.53□□□□□ -2
E2F3O00716 HSPE1P11-201ENST00000339579 310 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU4-75P-201ENST00000364621 146 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU5A-6P-201ENST00000384136 116 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU2-68P-201ENST00000410878 191 ntBASIC2.53□□□□□ -2
E2F3O00716 RNA5SP508-201ENST00000411327 119 ntBASIC2.53□□□□□ -2
E2F3O00716 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.53□□□□□ -2
E2F3O00716 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.53□□□□□ -2
E2F3O00716 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.53□□□□□ -2
E2F3O00716 USP9YP14-201ENST00000430663 563 ntBASIC2.53□□□□□ -2
E2F3O00716 AL358934.1-201ENST00000432346 324 ntBASIC2.53□□□□□ -2
E2F3O00716 MTND4P25-201ENST00000441039 533 ntBASIC2.53□□□□□ -2
E2F3O00716 NEFMP1-201ENST00000443423 1006 ntBASIC2.53□□□□□ -2
E2F3O00716 AL513328.1-201ENST00000446460 224 ntBASIC2.53□□□□□ -2
E2F3O00716 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
E2F3O00716 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.53□□□□□ -2
E2F3O00716 AC128713.1-201ENST00000471495 306 ntBASIC2.53□□□□□ -2
E2F3O00716 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.53□□□□□ -2
E2F3O00716 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU6-405P-201ENST00000516637 110 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU6-1092P-201ENST00000516955 87 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU6-430P-201ENST00000517078 107 ntBASIC2.53□□□□□ -2
E2F3O00716 RNU6-1220P-201ENST00000517126 108 ntBASIC2.53□□□□□ -2
E2F3O00716 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
E2F3O00716 BTF3P12-201ENST00000519620 469 ntBASIC2.53□□□□□ -2
E2F3O00716 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.53□□□□□ -2
E2F3O00716 AL391840.1-201ENST00000571144 367 ntBASIC2.53□□□□□ -2
E2F3O00716 AC007151.1-201ENST00000572774 483 ntBASIC2.53□□□□□ -2
E2F3O00716 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
E2F3O00716 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.53□□□□□ -2
E2F3O00716 AC098826.3-201ENST00000603823 466 ntBASIC2.53□□□□□ -2
E2F3O00716 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.53□□□□□ -2
E2F3O00716 AC087241.4-201ENST00000612441 480 ntBASIC2.53□□□□□ -2
E2F3O00716 Z99129.1-201ENST00000612510 255 ntBASIC2.53□□□□□ -2
E2F3O00716 AL359757.2-201ENST00000624309 274 ntBASIC2.53□□□□□ -2
E2F3O00716 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.53□□□□□ -2
E2F3O00716 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
E2F3O00716 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
E2F3O00716 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
E2F3O00716 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
E2F3O00716 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
E2F3O00716 AC073343.1-201ENST00000328239 651 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms