Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.79□□□□□ -1.96
O00370 RPS15AP9-201ENST00000439856 381 ntBASIC2.79□□□□□ -1.96
O00370 AC108938.1-201ENST00000451204 136 ntBASIC2.79□□□□□ -1.96
O00370 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.79□□□□□ -1.96
O00370 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.79□□□□□ -1.96
O00370 AC133134.1-201ENST00000466800 359 ntBASIC2.79□□□□□ -1.96
O00370 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.79□□□□□ -1.96
O00370 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
O00370 FAM92A1P1-201ENST00000528023 890 ntBASIC2.79□□□□□ -1.96
O00370 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.79□□□□□ -1.96
O00370 AL391261.3-201ENST00000557194 520 ntBASIC2.79□□□□□ -1.96
O00370 BNIP3P9-201ENST00000603714 553 ntBASIC2.79□□□□□ -1.96
O00370 AC136601.2-201ENST00000604356 474 ntBASIC2.79□□□□□ -1.96
O00370 AL365204.3-201ENST00000612448 685 ntBASIC2.79□□□□□ -1.96
O00370 MIR6863-201ENST00000636112 90 ntBASIC2.79□□□□□ -1.96
O00370 MTND5P42-201ENST00000637720 498 ntBASIC2.79□□□□□ -1.96
O00370 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
O00370 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
O00370 Y_RNA.1-201ENST00000352915 104 ntBASIC2.78□□□□□ -1.96
O00370 RNU6-217P-201ENST00000384164 104 ntBASIC2.78□□□□□ -1.96
O00370 MIR34A-201ENST00000385130 110 ntBASIC2.78□□□□□ -1.96
O00370 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
O00370 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
O00370 UBE2V1P2-201ENST00000397758 440 ntBASIC2.78□□□□□ -1.96
O00370 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.78□□□□□ -1.96
O00370 RPS15AP7-201ENST00000439294 405 ntBASIC2.78□□□□□ -1.96
O00370 AC011816.1-201ENST00000441346 546 ntBASIC2.78□□□□□ -1.96
O00370 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.78□□□□□ -1.96
O00370 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.78□□□□□ -1.96
O00370 AC107401.1-201ENST00000503426 685 ntBASIC2.78□□□□□ -1.96
O00370 MTND2P33-201ENST00000506452 1031 ntBASIC2.78□□□□□ -1.96
O00370 AC108078.1-201ENST00000508073 725 ntBASIC2.78□□□□□ -1.96
O00370 RBBP4P6-201ENST00000508098 202 ntBASIC2.78□□□□□ -1.96
O00370 AC114786.4-201ENST00000508771 728 ntBASIC2.78□□□□□ -1.96
O00370 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.78□□□□□ -1.96
O00370 SNORA31.3-201ENST00000516029 96 ntBASIC2.78□□□□□ -1.96
O00370 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.78□□□□□ -1.96
O00370 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.78□□□□□ -1.96
O00370 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.78□□□□□ -1.96
O00370 ADI1P3-201ENST00000549509 470 ntBASIC2.78□□□□□ -1.96
O00370 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.78□□□□□ -1.96
O00370 AC025281.1-201ENST00000567026 265 ntBASIC2.78□□□□□ -1.96
O00370 MIR4513-201ENST00000581077 86 ntBASIC2.78□□□□□ -1.96
O00370 AL022154.1-201ENST00000604698 785 ntBASIC2.78□□□□□ -1.96
O00370 AC012409.4-201ENST00000612923 249 ntBASIC2.78□□□□□ -1.96
O00370 AC136475.10-201ENST00000620253 385 ntBASIC2.78□□□□□ -1.96
O00370 AC093648.1-201ENST00000623546 606 ntBASIC2.78□□□□□ -1.96
O00370 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
O00370 AL157786.1-207ENST00000627771 695 ntBASIC2.78□□□□□ -1.96
O00370 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
O00370 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
O00370 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
O00370 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.77□□□□□ -1.97
O00370 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
O00370 RNU6-884P-201ENST00000363889 107 ntBASIC2.77□□□□□ -1.97
O00370 RNU6-108P-201ENST00000365558 107 ntBASIC2.77□□□□□ -1.97
O00370 Y_RNA.409-201ENST00000383990 98 ntBASIC2.77□□□□□ -1.97
O00370 AL139039.1-201ENST00000401900 692 ntBASIC2.77□□□□□ -1.97
O00370 AL591416.1-201ENST00000404015 867 ntBASIC2.77□□□□□ -1.97
O00370 RNU2-68P-201ENST00000410878 191 ntBASIC2.77□□□□□ -1.97
O00370 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.77□□□□□ -1.97
O00370 NUP35P1-201ENST00000422734 947 ntBASIC2.77□□□□□ -1.97
O00370 SNRPEP9-201ENST00000436794 238 ntBASIC2.77□□□□□ -1.97
O00370 RPL23AP20-201ENST00000447965 421 ntBASIC2.77□□□□□ -1.97
O00370 AC132479.1-201ENST00000449160 144 ntBASIC2.77□□□□□ -1.97
O00370 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
O00370 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.77□□□□□ -1.97
O00370 AL162395.1-201ENST00000457882 422 ntBASIC2.77□□□□□ -1.97
O00370 TPTE2P5-203ENST00000458118 728 ntBASIC2.77□□□□□ -1.97
O00370 MRPS17P3-201ENST00000465453 385 ntBASIC2.77□□□□□ -1.97
O00370 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.77□□□□□ -1.97
O00370 AC113155.1-201ENST00000511141 769 ntBASIC2.77□□□□□ -1.97
O00370 MIR3117-201ENST00000584034 78 ntBASIC2.77□□□□□ -1.97
O00370 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.77□□□□□ -1.97
O00370 DEFB131E-202ENST00000602581 683 ntBASIC2.77□□□□□ -1.97
O00370 NRBF2P5-201ENST00000603087 788 ntBASIC2.77□□□□□ -1.97
O00370 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.77□□□□□ -1.97
O00370 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.77□□□□□ -1.97
O00370 MIR7515-201ENST00000637837 67 ntBASIC2.77□□□□□ -1.97
O00370 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
O00370 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
O00370 MTND5P29-201ENST00000458676 1807 ntBASIC2.77□□□□□ -1.97
O00370 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
O00370 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
O00370 CKAP2P1-201ENST00000555477 2049 ntBASIC2.76□□□□□ -1.97
O00370 Y_RNA.41-201ENST00000362646 102 ntBASIC2.76□□□□□ -1.97
O00370 RNU6-1097P-201ENST00000363586 107 ntBASIC2.76□□□□□ -1.97
O00370 RNA5SP184-201ENST00000411071 108 ntBASIC2.76□□□□□ -1.97
O00370 RPLP0P7-201ENST00000416050 667 ntBASIC2.76□□□□□ -1.97
O00370 MTATP6P18-201ENST00000417994 673 ntBASIC2.76□□□□□ -1.97
O00370 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.76□□□□□ -1.97
O00370 AC098614.2-201ENST00000426040 255 ntBASIC2.76□□□□□ -1.97
O00370 ELOCP14-201ENST00000428070 331 ntBASIC2.76□□□□□ -1.97
O00370 ARL5AP4-201ENST00000430731 512 ntBASIC2.76□□□□□ -1.97
O00370 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.76□□□□□ -1.97
O00370 ELOCP7-201ENST00000439968 331 ntBASIC2.76□□□□□ -1.97
O00370 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.76□□□□□ -1.97
O00370 AL109933.2-201ENST00000452651 260 ntBASIC2.76□□□□□ -1.97
O00370 RPL26P9-201ENST00000457466 433 ntBASIC2.76□□□□□ -1.97
O00370 AC022364.2-201ENST00000457963 554 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms